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Guilliams, M, Bonnardel, J, Haest, B, Vanderborght, B, Wagner, C, Remmerie, A, Bujko, A, Martens, L, Thone, T, Browaeys, R, De Ponti, FF, Vanneste, B, Zwicker, C, Svedberg, FR, Vanhalewyn, T, Goncalves, A, Lippens, S, Devriendt, B, Cox, E, et al..
Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches
Cell 185, 379-396, 2022. (Epub 2022 Jan 22)

Maes, B, Smole, U, Vanderkerken, M, Deswarte, K, Van Moorleghem, J, Vergote, K, Vanheerswynghels, M, De Wolf, C, De Prijck, S, Debeuf, N, Pavie, B, Toussaint, W, Janssens, S, Savvides, S, Lambrecht, BN, Hammad, H.
The STE20 kinase TAOK3 controls the development house dust mite-induced asthma in mice
J Allergy Clin Immunol 149, 1413-1427, 2022. (Epub 2021 Sep 8)

Adami, V, Homer, N, Utz, N, Lippens, S, Rappoport, JZ, Fernandez-Rodriguez, J.
An international survey of Training Needs and Career Paths of Core Facility Staff
J Biomol Tech 32, 1-9, 2021. (Epub 2020 Nov 20)

Almeida, L, Dhillon-LaBrooy, A, Castro, CN, Adossa, N, Carriche, GM, Guderian, M, Lippens, S, Dennerlein, S, Hesse, C, Lambrecht, BN, Berod, L, Schauser, L, Blazar, BR, Kalesse, M, Muller, R, Moita, LF, Sparwasser, T.
Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Immunity 54, 68-83, 2021. (Epub 2020 Nov 24)

Anderson, CJ, Medina, CB, Barron, BJ, Karvelyte, L, Aaes, TL, Lambertz, I, Perry, JSA, Mehrotra, P, Goncalves, A, Lemeire, K, Blancke, G, Andries, V, Ghazavi, F, Martens, A, van Loo, G, Vereecke, L, Vandenabeele, P, Ravichandran, KS.
Microbes exploit death-induced nutrient release by gut epithelial cells
Nature 596, 262-267, 2021. (Epub 2021 Aug 4)

Geeraerts, X, Fernandez-Garcia, J, Hartmann, FJ, de Goede, KE, Martens, L, Elkrim, Y, Debraekeleer, A, Stijlemans, B, Vandekeere, A, Rinaldi, G, De Rycke, R, Planque, M, Broekaert, D, Meinster, E, Clappaert, E, Bardet, P, Murgaski, A, Gysemans, C, Nana, FA, et al..
Macrophages are metabolically heterogeneous within the tumor microenvironment
Cell Rep 37, 110171, 2021. (Epub 2021 Dec 28)

Guerin, CJ, Lippens, S.
Correlative light and volume electron microscopy (vCLEM): How community participation can advance developing technologies
J Microsc 284, 97-102, 2021. (Epub 2021 Sep 20)

Harizaj, A, Van Hauwermeiren, F, Stremersch, S, De Rycke, R, De Keersmaecker, H, Brans, T, Fraire, JC, Grauwen, K, De Smedt, SC, Lentacker, I, Lamkanfi, M, Braeckmans, K.
Nanoparticle-sensitized photoporation enables inflammasome activation studies in targeted single cells
Nanoscale 13, 6592-6604, 2021. (Epub 2021 Mar 26)

Kremer, A, Van Hamme, E, Bonnardel, J, Borghgraef, P, Guérin, C, Guilliams, M, Lippens, S.
A workflow for 3D-CLEM investigating liver tissue
J Microsc 281, 231-242, 2021. (Epub 2020 Oct 9)

Li, H, von Wangenheim, D, Zhang, X, Tan, S, Darwish-Miranda, N, Naramoto, S, Wabnik, K, De Rycke, R, Kaufmann, WA, Gutl, D, Tejos, R, Grones, P, Ke, M, Chen, X, Dettmer, J, Friml, J.
Cellular requirements for PIN polar cargo clustering in Arabidopsis thaliana
New Phytol 229, 351-369, 2021. (Epub 2020 Aug 18)

Meyts, I, Bucciol, G, Quinti, I, Neven, B, Fischer, A, Seoane, E, Lopez-Granados, E, Gianelli, C, Robles-Marhuenda, A, Jeandel, PY, Paillard, C, Sankaran, VG, Demirdag, YY, et al, Bosteels, C, Lambrecht, BN, et al..
Coronavirus Disease 2019 in patients with inborn errors of immunity: an international study
J Allergy Clin Immunol 147, 520-531, 2021. (Epub 2020 Sep 24)

Ornelas, S, Berthiaume, AA, Bonney, SK, Coelho-Santos, V, Underly, RG, Kremer, A, Guerin, CJ, Lippens, S, Shih, AY.
Three-dimensional ultrastructure of the brain pericyte-endothelial interface
J Cereb Blood Flow Metab 41, 2185-2200, 2021. (Epub 2021 May 10)

Pottie, L, Adamo, CS, Beyens, A, Lutke, S, Tapaneeyaphan, P, De Clercq, A, Salmon, PL, De Rycke, R, Gezdirici, A, Gulec, EY, Khan, N, Urquhart, JE, Newman, WG, Metcalfe, K, Efthymiou, S, Maroofian, R, Anwar, N, Maqbool, S, Rahman, F, et al..
Bi-allelic premature truncating variants in LTBP1 cause cutis laxa syndrome
Am J Hum Genet 108, 1095-1114, 2021. (Epub 2021 May 14)

Shaabani, E, Sharifiaghdam, M, De Keersmaecker, H, De Rycke, R, De Smedt, S, Faridi-Majidi, R, Braeckmans, K, Fraire, JC.
Layer by Layer Assembled Chitosan-Coated Gold Nanoparticles for Enhanced siRNA Delivery and Silencing
Int J Mol Sci 22, 831, 2021. (Epub 2021 Jan 15)

Sharifiaghdam, M, Shaabani, E, Sharifiaghdam, Z, De Keersmaecker, H, De Rycke, R, De Smedt, S, Faridi-Majidi, R, Braeckmans, K, Fraire, JC.
Enhanced siRNA Delivery and Selective Apoptosis Induction in H1299 Cancer Cells by Layer-by-Layer-Assembled Se Nanocomplexes: Toward More Efficient Cancer Therapy
Front Mol Biosci 8, 639184, 2021. (Epub 2021 Apr 20)

Vandendriessche, C, Balusu, S, Van Cauwenberghe, C, Brkic, M, Pauwels, M, Plehiers, N, Bruggeman, A, Dujardin, P, Van Imschoot, G, Van Wonterghem, E, Hendrix, A, Baeke, F, De Rycke, R, Gevaert, K, Vandenbroucke, RE.
Importance of extracellular vesicle secretion at the blood-cerebrospinal fluid interface in the pathogenesis of Alzheimer's disease
Acta Neuropathol Commun 9, 143, 2021. (Epub 2021 Aug 23)

Van Hoecke, L, Van Cauwenberghe, C, Dominko, K, Van Imschoot, G, Van Wonterghem, E, Castelein, J, Xie, J, Claeys, W, Vandendriessche, C, Kremer, A, Borghgraef, P, De Rycke, R, Hecimovic, S, Vandenbroucke, RE.
Involvement of the Choroid Plexus in the Pathogenesis of Niemann-Pick Disease Type C
Front Cell Neurosci 15, 757482, 2021. (Epub 2021 Oct 15)

Xie, J, Gorle, N, Vandendriessche, C, Van Imschoot, G, Van Wonterghem, E, Van Cauwenberghe, C, Parthoens, E, Van Hamme, E, Lippens, S, Van Hoecke, L, Vandenbroucke, RE.
Low-grade peripheral inflammation affects brain pathology in the App(NL-G-F)mouse model of Alzheimer's disease
Acta Neuropathol Commun 9, 163, 2021. (Epub 2021 Oct 7)

Ascari, G, Peelman, F, Farinelli, P, Rosseel, T, Lambrechts, N, Wunderlich, KA, Wagner, M, Nikopoulos, K, Martens, P, Balikova, I, Derycke, L, Holtappels, G, Krysko, O, Van Laethem, T, De Jaegere, S, Guillemyn, B, De Rycke, R, De Bleecker, J, Creytens, D, et al..
Functional characterization of the first missense variant in CEP78, a founder allele associated with cone-rod dystrophy, hearing loss, and reduced male fertility
Hum Mutat 41, 998-1011, 2020. (Epub 2020 Jan 30)

Aw, R, De Wachter, C, Laukens, B, De Rycke, R, De Bruyne, M, Bell, D, Callewaert, N, Polizzi, KM.
Knockout of RSN1, TVP18 or CSC1-2 causes perturbation of Golgi cisternae in Pichia pastoris
Traffic , in press, 2020. (Epub 2020 Dec 2)

Bauwens, M, Storch, S, Weisschuh, N, Ceuterick-de Groote, C, De Rycke, R, Guillemyn, B, De Jaegere, S, Coppieters, F, Van Coster, R, Leroy, BP, De Baere, E.
Functional characterization of novel MFSD8 pathogenic variants anticipates neurological involvement in juvenile isolated maculopathy
Clin Genet 97, 426-436, 2020. (Epub 2019 Nov 13)

Delbaere, S, Dhooge, T, Syx, D, Petit, F, Goemans, N, Destree, A, Vanakker, O, De Rycke, R, Symoens, S, Malfait, F.
Novel defects in collagen XII and VI expand the mixed myopathy/Ehlers-Danlos syndrome spectrum and lead to variant-specific alterations in the extracellular matrix
Genet Med 22, 112-123, 2020. (Epub 2019 Jul 5)

De Samber, B, De Rycke, R, De Bruyne, M, Kienhuis, M, Sandblad, L, Bohic, S, Cloetens, P, Urban, C, Polerecky, L, Vincze, L.
Effect of sample preparation techniques upon single cell chemical imaging: A practical comparison between synchrotron radiation based X-ray fluorescence (SR-XRF) and Nanoscopic Secondary Ion Mass Spectrometry (nano-SIMS)
Anal Chim Acta 1106, 22-32, 2020. (Epub 2020 Apr 15)

Fraire, JC, Houthaeve, G, Liu, J, Raes, L, Vermeulen, L, Stremersch, S, Brans, T, Garcia-Diaz Barriga, G, De Keulenaer, S, Van Nieuwerburgh, F, De Rycke, R, Vandesompele, J, Mestdagh, P, Raemdonck, K, De Vos, WH, De Smedt, S, Braeckmans, K.
Vapor nanobubble is the more reliable photothermal mechanism for inducing endosomal escape of siRNA without disturbing cell homeostasis
J Control Release 319, 262-275, 2020. (Epub 2020 Jan 2)

Kerstens, W, Kremer, A, Holtappels, M, Borghgraef, P, Lippens, S, Van Dijck, P.
Three-Dimensional Visualization of APEX2-Tagged Erg11 in Saccharomyces cerevisiae Using Focused Ion Beam Scanning Electron Microscopy
mSphere 5, e00981-19, 2020. (Epub 2020 Feb 5)

Liu, J, Hebbrecht, T, Brans, T, Parthoens, E, Lippens, S, Li, CN, De Keersmaecker, H, De Vos, WH, De Smedt, SC, Boukherroub, R, Gettemans, J, Xiong, RH, Braeckmans, K.
Long-term live-cell microscopy with labeled nanobodies delivered by laser-induced photoporation
Nano Research 13, 485-495, 2020. (Epub 2020 Jan 17)

Meerpoel, C, Vidal, A, Tangni, EK, Huybrechts, B, Couck, L, De Rycke, R, De Bels, L, De Saeger, S, Van den Broeck, W, Devreese, M, Croubels, S.
A Study of Carry-Over and Histopathological Effects after Chronic Dietary Intake of Citrinin in Pigs, Broiler Chickens and Laying Hens
Toxins (Basel) 12, 719, 2020. (Epub 2020 Nov 16)

Remmerie, A, Martens, L, Thone, T, Castoldi, A, Seurinck, R, Pavie, B, Roels, J, Vanneste, B, De Prijck, S, Vanhockerhout, M, Binte Abdul Latib, M, Devisscher, L, Hoorens, A, Bonnardel, J, Vandamme, N, Kremer, A, Borghgraef, P, Van Vlierberghe, H, Lippens, S, Pearce, E., Saeys, Y, Scott, CL.
Osteopontin Expression Identifies a Subset of Recruited Macrophages Distinct from Kupffer Cells in the Fatty Liver
Immunity 53, 641-657 e14, 2020. (Epub 2020 Aug 26)

Roels, J, Vernaillen, F, Kremer, A, Goncalves, A, Aelterman, J, Luong, HQ, Goossens, B, Philips, W, Lippens, S, Saeys, Y.
An interactive ImageJ plugin for semi-automated image denoising in electron microscopy
Nat Commun 11, 771, 2020. (Epub 2020 Feb 7)

Schoonvaere, K, Brunain, M, Baeke, F, De Bruyne, M, De Rycke, R, de Graaf, DC.
Comparison between Apicystis cryptica sp. n. and Apicystis bombi (Arthrogregarida, Apicomplexa): Gregarine parasites that cause fat body hypertrophism in bees
Eur J Protistol 73, 125688, 2020. (Epub 2020 Feb 21)

Souffriau, J, Timmermans, S, Vanderhaeghen, T, Wallaeys, C, Van Looveren, K, Aelbrecht, L, Dewaele, S, Vandewalle, J, et al., Eggermont, M, De Rycke, R, De Bruyne, M, Ballegeer, M, Vandevyver, S, Hochepied, T, Beyaert, R, Libert, C.
Zinc inhibits lethal inflammatory shock by preventing microbe-induced interferon signature in intestinal epithelium
EMBO Mol Med , e11917, 2020. (Epub 2020 Sep 11)

Vanslembrouck, B, Kremer, A, Van Roy, F, Lippens, S, van Hengel, J.
Unravelling the ultrastructural details of alphaT-catenin-deficient cell-cell contacts between heart muscle cells by the use of FIB-SEM
J Microsc 279, 189–196 , 2020. (Epub 2019 Dec 11)

Van Wyngene, L, Vanderhaeghen, T, Timmermans, S, Vandewalle, J, Van Looveren, K, Souffriau, J, Wallaeys, C, Eggermont, M, Ernst, S, Van Hamme, E, Goncalves, A, Eelen, G, Remmerie, A, Scott, CL, Rombouts, C, Vanhaecke, L, De Bus, L, Decruyenaere, J, Carmeliet, P, et al..
Hepatic PPARalpha function and lipid metabolic pathways are dysregulated in polymicrobial sepsis
EMBO Mol Med , e11319, 2020. (Epub 2020 Jan 9)

Beyens, A, Van Meensel, K, Pottie, L, De Rycke, R, De Bruyne, M, Baeke, F, Hoebeke, P, Plasschaert, F, Loeys, B, De Schepper, S, Symoens, S, Callewaert, B.
Defining the Clinical, Molecular and Ultrastructural Characteristics in Occipital Horn Syndrome: Two New Cases and Review of the Literature
Genes (Basel) 10, 528, 2019. (Epub 2019 Jul 12)

Bonnardel, J, T'Jonck, W, Gaublomme, D, Browaeys, R, Scott, CL, Martens, L, Vanneste, B, De Prijck, S, Nedospasov, SA, Kremer, A, Van Hamme, E, Borghgraef, P, Toussaint, W, De Bleser, P, Mannaerts, I, Beschin, A, van Grunsven, LA, Lambrecht, BN, Taghon, T, et al..
Stellate Cells, Hepatocytes, and Endothelial Cells Imprint the Kupffer Cell Identity on Monocytes Colonizing the Liver Macrophage Niche
Immunity 51, 638-654, 2019. (Epub 2019 Sep 24)

Corneillie, S, De Storme, N, Van Acker, R, Fangel, JU, De Bruyne, M, De Rycke, RM, Geelen, DNV, Willats, WGT, Vanholme, B, Boerjan, WA.
Polyploidy affects plant growth and alters cell wall composition
Plant Physiol 179, 74-87, 2019. (Epub 2018 Oct 9)

Debeuf, N, Zhakupova, A, Steiner, R, Van Gassen, S, Deswarte, K, Fayazpour, F, Van Moorleghem, J, Vergote, K, Pavie, B, Lemeire, K, Hammad, H, Hornemann, T, Janssens, S, Lambrecht, BN.
The ORMDL3 asthma susceptibility gene regulates systemic ceramide levels without altering key asthma features in mice
J Allergy Clin Immunol 144, 1648-1659, 2019. (Epub 2019 Jul 20)

Dejonghe, W, Sharma, I, Denoo, B, De Munck, S, Lu, Q, Mishev, K, Bulut, H, Mylle, E, De Rycke, R, Vasileva, M, Savatin, DV, Nerinckx, W, Staes, A, Drozdzecki, A, Audenaert, D, Yperman, K, Madder, A, Friml, J, Van Damme, D, et al..
Disruption of endocytosis through chemical inhibition of clathrin heavy chain function
Nat Chem Biol 15, 641–649, 2019. (Epub 2019 Apr 22)

Delvaeye, T, De Smet, MAJ, Verwaerde, S, Decrock, E, Czekaj, A, Vandenbroucke, RE, Lemeire, K, Goncalves, A, Declercq, W, Vandenabeele, P, Krysko, DV, Leybaert, L.
Blocking connexin43 hemichannels protects mice against tumour necrosis factor-induced inflammatory shock
Sci Rep 9, 16623, 2019. (Epub 2019 Nov 12)

Dendoncker, K, Timmermans, S, Vandewalle, J, Eggermont, M, Lempiainen, J, Van Hamme, E, Dewaele, S, Vandevyver, S, Ballegeer, M, Souffriau, J, Van Wyngene, L, Van Looveren, K, Vanderhaeghen, T, Beyaert, R, De Bosscher, K, Palvimo, JJ, Van Montagu, M, Libert, C.
TNF-alpha inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile
Proc Natl Acad Sci U S A 116, 12942-12951, 2019. (Epub 2019 Jun 10)

de Vasconcelos, NM, Van Opdenbosch, N, Van Gorp, H, Parthoens, E, Lamkanfi, M.
Single-cell analysis of pyroptosis dynamics reveals conserved GSDMD-mediated subcellular events that precede plasma membrane rupture
Cell Death Differ 26, 146-161, 2019. (Epub 2018 Apr 17)

de Vasconcelos, NM, Vliegen, G, Goncalves, A, De Hert, E, Martin-Perez, R, Van Opdenbosch, N, Jallapally, A, Geiss-Friedlander, R, Lambeir, AM, Augustyns, K, Van Der Veken, P, De Meester, I, Lamkanfi, M.
DPP8/DPP9 inhibition elicits canonical Nlrp1b inflammasome hallmarks in murine macrophages
Life Sci Alliance 2, e201900313, 2019. (Epub 2019 Feb 4)

Fioravanti, A, Van Hauwermeiren, F, Van der Verren, SE, Jonckheere, W, Goncalves, A, Pardon, E, Steyaert, J, De Greve, H, Lamkanfi, M, Remaut, H.
Structure of S-layer protein Sap reveals a mechanism for therapeutic intervention in anthrax
Nat Microbiol 4, 1805-1814, 2019. (Epub 2019 Jul 15)

Fraire, JC, Stremersch, S, Bouckaert, D, Monteyne, T, De Beer, T, Wuytens, P, De Rycke, R, Skirtach, AG, Raemdonck, K, De Smedt, S, Braeckmans, K.
Improved Label-Free Identification of Individual Exosome-like Vesicles with Au@Ag Nanoparticles as SERS Substrate
ACS Appl Mater Interfaces 11, 39424-39435, 2019. (Epub 2019 Oct 16)

Guerin, CJ, Kremer, A, Borghgraef, P, Shih, AY, Lippens, S.
Combining serial block face and focused ion beam scanning electron microscopy for 3D studies of rare events
Methods Cell Biol 152, 87-101, 2019. (Epub 2019 May 7)

Guérin, CJ, Kremer, A, Borghgraef, P, Lippens, S.
Targeted Studies Using Serial Block Face and Focused Ion Beam Scan Electron Microscopy.
J Vis Exp 150, e59480, 2019. (Epub 2019 Aug 10)

Hoste, E, Maueroder, C, van Hove, L, Catrysse, L, Vikkula, HK, Sze, M, Maes, B, Karjosukarso, D, Martens, L, Goncalves, A, Parthoens, E, Roelandt, R, Declercq, W, Fuentes, I, Palisson, F, Gonzalez, S, Salas-Alanis, JC, Boon, L, Huebener, P, et al..
Epithelial HMGB1 Delays Skin Wound Healing and Drives Tumor Initiation by Priming Neutrophils for NET Formation
Cell Rep 29, 2689-2701, 2019. (Epub 2019 Nov 26)

Krols, M, Asselbergh, B, De Rycke, R, De Winter, V, Seyer, A, Muller, FJ, Kurth, I, Bultynck, G, Timmerman, V, Janssens, S.
Sensory neuropathy-causing mutations in ATL3 affect ER-mitochondria contact sites and impair axonal mitochondrial distribution
Hum Mol Genet 28, 615–627, 2019. (Epub 2018 Oct 18)

Lippens, S, D'Enfert, C, Farkas, L, Kehres, A, Korn, B, Morales, M, Pepperkok, R, Premvardhan, L, Schlapbach, R, Tiran, A, Meder, D, Van Minnebruggen, G.
One step ahead: Innovation in core facilities
EMBO Rep , e48017, 2019. (Epub 2019 Mar 14)

Lippens, S, Kremer, A, Borghgraef, P, Guerin, CJ.
Serial block face-scanning electron microscopy for volume electron microscopy
Methods Cell Biol 152, 69-85, 2019. (Epub 2019 Jun 17)

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