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Couckuyt, A, Seurinck, R, Emmaneel, A, Quintelier, K, Novak, D, Van Gassen, S, Saeys, Y. Challenges in translational machine learning Human Genetics , in press, 2022. (Epub 2022 Mar 4) ![]() ![]() ![]() ![]() ![]() ![]() |
Cannoodt, R, Saelens, W, Deconinck, L, Saeys, Y. Spearheading future omics analyses using dyngen, a multi-modal simulator of single cells Nat Commun 12, 3942, 2021. (Epub 2021 Jun 24) ![]() ![]() ![]() ![]() ![]() ![]() |
Deconinck, L, Cannoodt, R, Saelens, W, Deplancke, B, Saeys, Y. Recent advances in trajectory inference from single-cell omics data Current Opinion in Systems Biology 27, 100344, 2021. (Epub 2021 Sep) ![]() ![]() ![]() ![]() ![]() ![]() |
Peralta, D, Tang, L, Lippeveld, M, Saeys, Y. A study on the calibration of fingerprint classifiers 2021 Ieee International Conference on Big Data (Big Data) , 698-704, 2021. (Epub 2021 Dec) ![]() ![]() ![]() ![]() ![]() ![]() |
Quintelier, K, Couckuyt, A, Emmaneel, A, Aerts, J, Saeys, Y, Van Gassen, S. Analyzing high-dimensional cytometry data using FlowSOM Nat Protoc 16, 3775-3801, 2021. (Epub 2021 Jun 25) ![]() ![]() ![]() ![]() ![]() ![]() |
Vandaele, R, Rieck, B, Saeys, Y, De Bie, T. Stable topological signatures for metric trees through graph approximations Pattern Recognition Letters 147, 85-92, 2021. (Epub 2021 April 14) ![]() ![]() ![]() ![]() ![]() ![]() |
Vandaele, R, Saeys, Y, De Bie, T. Graph approximations to geodesics on metric graphs 2020 25TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION (ICPR) , 7328-7334, 2021. (Epub ) ![]() ![]() ![]() ![]() ![]() ![]() |
Browaeys, R, Saelens, W, Saeys, Y. NicheNet: modeling intercellular communication by linking ligands to target genes Nat Methods 17, 159-162, 2020. (Epub 2019 Dec 9) ![]() ![]() ![]() ![]() ![]() ![]() |
Peck, J, Goossens, B, Saeys, Y. Detecting adversarial manipulation using inductive Venn-ABERS predictors Neurocomputing 416, 202-217, 2020. (Epub 2020 Apr 10) ![]() ![]() ![]() ![]() ![]() ![]() |
Peralta, D, Saeys, Y. Robust unsupervised dimensionality reduction based on feature clustering for single-cell imaging data Applied Soft Computing Journal 93, 106421, 2020. (Epub 2020 May 23) ![]() ![]() ![]() ![]() ![]() ![]() |
Saeys, Y, Finak, G. Special Issue on Machine Learning for Single Cell Data Cytometry A 97, 217-218, 2020. (Epub 2020 Mar 6) ![]() ![]() ![]() ![]() ![]() ![]() |
Todorov, H, Cannoodt, R, Saelens, W, Saeys, Y. TinGa: fast and flexible trajectory inference with Growing Neural Gas Bioinformatics 36, i66-i74, 2020. (Epub 2020 Jul 1) ![]() ![]() ![]() ![]() ![]() ![]() |
Vandaele, R, Saeys, Y, De Bie, T. Mining Topological Structure in Graphs through Forest Representations Journal of Machine Learning Research 21, 1-68, 2020. (Epub Oct 2020) ![]() ![]() ![]() ![]() ![]() ![]() |
Van Gassen, S, Gaudilliere, B, Angst, MS, Saeys, Y, Aghaeepour, N. CytoNorm: A Normalization Algorithm for Cytometry Data Cytometry A 97, 268-278, 2020. (Epub 2019 Oct 21) ![]() ![]() ![]() ![]() ![]() ![]() |