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Publications by this IRC author

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Zuallaert, J, Godin, F, Kim, M, Soete, A, Saeys, Y, De Neve, W.
SpliceRover: Interpretable Convolutional Neural: Networks for Improved Splice Site Prediction
Bioinformatics 34, 4180-4188, 2018. (Epub 2018 Jun 21)

Zuallaert, J, Kim, M, Soete, A, Saeys, Y, De Neve, W.
TISRover: ConvNets learn biologically relevant features for effective translation initiation site prediction
International Journal of Data Mining and Bioinformatics 20, 267-284, 2018. (Epub 2018)

Kreft, L, Soete, A, Hulpiau, P, Botzki, A, Saeys, Y, De Bleser, P.
ConTra v3: a tool to identify transcription factor binding sites across species, update 2017
Nucleic Acids Res 45, W490-W494, 2017. (Epub 2017 May 4)

Lin, YC, Boone, M, Meuris, L, Lemmens, I, Van Roy, N, Soete, A, Reumers, J, Moisse, M, Plaisance, S, Drmanac, R, Chen, J, Speleman, F, Lambrechts, D, Van de Peer, Y, Tavernier, J, Callewaert, N.
Genome dynamics of the human embryonic kidney 293 lineage in response to cell biology manipulations
Nat Commun 5, 4767, 2014. (Epub 2014 Sep 3)

Broos, S, Soete, A, Hooghe, B, Moran, R, van Roy, F, De Bleser, P.
PhysBinder: improving the prediction of transcription factor binding sites by flexible inclusion of biophysical properties
Nucleic Acids Res 41, W531-534, 2013. (Epub 2013 Apr 24)

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