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Selected IRC publications
The IRC publications that match your query are listed below.
For copyright reasons, PDF-versions of our publications are available on the intranet only (login required 
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Maslova, A, Ramirez, RN, Ma, K, Schmutz, H, Wang, C, Fox, C, Ng, B, Benoist, C, Mostafavi, S, Immunological Genome Project. Deep learning of immune cell differentiation Proc Natl Acad Sci U S A 117, 25655-25666, 2020. (Epub 2020 Sep 25) 
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Medina, CB, Mehrotra, P, Arandjelovic, S, Perry, JSA, Guo, Y, Morioka, S, Barron, B, Walk, SF, Ghesquiere, B, Krupnick, AS, Lorenz, U, Ravichandran, KS. Metabolites released from apoptotic cells act as tissue messengers Nature 580, 130-135, 2020. (Epub 2020 Mar 18)
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Meerpoel, C, Vidal, A, Tangni, EK, Huybrechts, B, Couck, L, De Rycke, R, De Bels, L, De Saeger, S, Van den Broeck, W, Devreese, M, Croubels, S. A Study of Carry-Over and Histopathological Effects after Chronic Dietary Intake of Citrinin in Pigs, Broiler Chickens and Laying Hens Toxins (Basel) 12, 719, 2020. (Epub 2020 Nov 16)
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Melsens, K, Leone, MC, Paolino, S, Elewaut, D, Gerli, R, Vanhaecke, A, Peene, I, Cutolo, M, Smith, V. Nailfold capillaroscopy in Sjogren's syndrome: a systematic literature review and standardised interpretation Clin Exp Rheumatol 38 Suppl 126, 150-157, 2020. (Epub 2020 Sep 21) 
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Minina, EA, Staal, J, Alvarez, VE, Berges, JA, Berman-Frank, I, Beyaert, R, Bidle, KD, Bornancin, F, Casanova, M, Cazzulo, JJ, Choi, CJ, Coll, NS, Dixit, VM, Dolinar, M, Fasel, N, Funk, C, Gallois, P, Gevaert, K, Gutierrez-Beltran, E, et al.. Classification and Nomenclature of Metacaspases and Paracaspases: No More Confusion with Caspases Mol Cell 77, 927-929, 2020. (Epub 2020 Mar 5)
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Naert, T, Dimitrakopoulou, D, Tulkens, D, Demuynck, S, Carron, M, Noelanders, R, Eeckhout, L, Van Isterdael, G, Deforce, D, Vanhove, C, Van Dorpe, J, Creytens, D, Vleminckx, K. RBL1 (p107) functions as tumor suppressor in glioblastoma and small-cell pancreatic neuroendocrine carcinoma in Xenopus tropicalis Oncogene 39, 2692-2706, 2020. (Epub 2020 Jan 30)
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Naert, T, Tulkens, D, Edwards, NA, Carron, M, Shaidani, NI, Wlizla, M, Boel, A, Demuynck, S, Horb, ME, Coucke, P, Willaert, A, Zorn, AM, Vleminckx, K. Maximizing CRISPR/Cas9 phenotype penetrance applying predictive modeling of editing outcomes in Xenopus and zebrafish embryos Sci Rep 10, 14662, 2020. (Epub 2020 Sep 04)
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Naessens, T, Morias, Y, Hamrud, E, Gehrmann, U, Budida, R, Mattsson, J, Baker, T, Skogberg, G, Israelsson, E, Thorn, K, Schuijs, MJ, Angermann, B, Melville, F, Staples, KJ, Cunoosamy, DM, Lambrecht, BN. Human Lung Conventional Dendritic Cells Orchestrate Lymphoid Neogenesis During COPD Am J Respir Crit Care Med 202, 535-548, 2020. (Epub 2020 Apr 7)
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Nguyen, PN, Tossounian, MA, Kovacs, DS, Thu, TT, Stijlemans, B, Vertommen, D, Pauwels, J, Gevaert, K, Angenon, G, Messens, J, Tompa, P. Dehydrin ERD14 activates glutathione transferase Phi9 in Arabidopsis thaliana under osmotic stress Biochim Biophys Acta Gen Subj 1864, 129506, 2020. (Epub 2019 Dec 20)
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Nust, D, Eddelbuettel, D, Bennett, D, Cannoodt, R, Clark, D, Daroczi, G, Edmondson, M, Fay, C, Hughes, E, Kjeldgaard, L, Lopp, S, Marwick, B, Nolis, H, Nolis, J, Ooi, H, Ram, K, Ross, N, Shepherd, L, Solymos, P, et al.. The Rockerverse: Packages and Applications for Containerisation with R R Journal 12, 437-461, 2020. (Epub 2020 Jun)
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Osier, F, Ting, JPY, Fraser, J, Lambrecht, BN, Romano, M, Gazzinelli, RT, Bortoluci, KR, Zamboni, DS, Akbar, AN, Evans, J, Brown, DE, Patel, KD, Wu, Y, Perez, AB, Perez, O, Kamradt, T, Falk, C, Barda-Saad, M, Ariel, A, et al.. The global response to the COVID-19 pandemic: how have immunology societies contributed? Nat Rev Immunol 20, 594-602, 2020. (Epub 2020 Sep 10)
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Park, JE, Botting, RA, Dominguez Conde, C, Popescu, DM, Lavaert, M, Kunz, DJ, Goh, I, Stephenson, E, Ragazzini, R, Tuck, E, Wilbrey-Clark, A, Roberts, K, Kedlian, VR, Ferdinand, JR, He, X, Webb, S, Maunder, D, Vandamme, N, Mahbubani, KT, et al.. A cell atlas of human thymic development defines T cell repertoire formation Science 367, eaay3224, 2020. (Epub 2020 Feb 21)
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Peck, J, Goossens, B, Saeys, Y. Detecting adversarial manipulation using inductive Venn-ABERS predictors Neurocomputing 416, 202-217, 2020. (Epub 2020 Apr 10)
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Pelst, MP, Hobart, C, Wallaeys, C, De Rooster, H, Gansemans, Y, Van Nieuwerburgh, F, Devriendt, B, Cox, E. Adjuvanting Allergen Extracts for Sublingual Immunotherapy: Calcitriol Downregulates CXCL8 Production in Primary Sublingual Epithelial Cells Front Immunol 11, 1033, 2020. (Epub 2020 Jun 9)
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Peralta, D, Saeys, Y. Robust unsupervised dimensionality reduction based on feature clustering for single-cell imaging data Applied Soft Computing Journal 93, 106421, 2020. (Epub 2020 May 23)
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Pieters, T, Sanders, E, Tian, H, van Hengel, J, van Roy, F. Neural defects caused by total and Wnt1-Cre mediated ablation of p120ctn in mice BMC Dev Biol 20, 17, 2020. (Epub 2020 Aug 03)
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Pombo Antunes, AR, Scheyltjens, I, Duerinck, J, Neyns, B, Movahedi, K, Van Ginderachter, JA. Understanding the glioblastoma immune microenvironment as basis for the development of new immunotherapeutic strategies Elife 9, e52176, 2020. (Epub 2020 Feb 4)
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Priem, D, van Loo, G, Bertrand, MJM. A20 and Cell Death-driven Inflammation Trends Immunol 41, 421-435, 2020. (Epub 2020 Mar 30)
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Qian, J, Olbrecht, S, Boeckx, B, Vos, H, Laoui, D, Etlioglu, E, Wauters, E, Pomella, V, Verbandt, S, Busschaert, P, Bassez, A, Franken, A, Bempt, MV, Xiong, J, Weynand, B, van Herck, Y, Antoranz, A, Bosisio, FM, Thienpont, B, et al.. A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling Cell Res 30, 745-762, 2020. (Epub 2020 Jun 19)
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Raaymakers, C, Stijlemans, B, Martin, C, Zaman, S, Ballet, S, Martel, A, Pasmans, F, Roelants, K. A New Family of Diverse Skin Peptides from the Microhylid Frog Genus Phrynomantis Molecules 25, 912, 2020. (Epub 2020 Feb 18)
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Remmerie, A, Martens, L, Scott, CL. Macrophage Subsets in Obesity, Aligning the Liver and Adipose Tissue Front Endocrinol (Lausanne) 11, 259, 2020. (Epub 2020 Apr 29)
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Remmerie, A, Martens, L, Thone, T, Castoldi, A, Seurinck, R, Pavie, B, Roels, J, Vanneste, B, De Prijck, S, Vanhockerhout, M, Binte Abdul Latib, M, Devisscher, L, Hoorens, A, Bonnardel, J, Vandamme, N, Kremer, A, Borghgraef, P, Van Vlierberghe, H, Lippens, S, Pearce, E., Saeys, Y, Scott, CL. Osteopontin Expression Identifies a Subset of Recruited Macrophages Distinct from Kupffer Cells in the Fatty Liver Immunity 53, 641-657 e14, 2020. (Epub 2020 Aug 26)
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Renson, T, Depicker, A, De Craemer, AS, Deroo, L, Varkas, G, de Hooge, M, Carron, P, Jans, L, Herregods, N, Dehaene, I, Vandenberghe, G, Roelens, K, Van den Bosch, FE, Elewaut, D. High prevalence of spondyloarthritis-like MRI lesions in postpartum women: a prospective analysis in relation to maternal, child and birth characteristics Ann Rheum Dis 79, 929-934, 2020. (Epub 2020 Apr 16)
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Roberti, MP, Yonekura, S, Duong, CPM, Picard, M, Ferrere, G, Tidjani Alou, M, , et al., Kourula, S, et al., Vanden Berghe, T, Ghiringhelli, F, Vandenabeele, P, Kroemer, G, Zitvogel, L. Chemotherapy-induced ileal crypt apoptosis and the ileal microbiome shape immunosurveillance and prognosis of proximal colon cancer Nat Med 26, 919-931, 2020. (Epub 2020 May 25)
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Roels, J, Vernaillen, F, Kremer, A, Goncalves, A, Aelterman, J, Luong, HQ, Goossens, B, Philips, W, Lippens, S, Saeys, Y. An interactive ImageJ plugin for semi-automated image denoising in electron microscopy Nat Commun 11, 771, 2020. (Epub 2020 Feb 7)
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Romao, E, Krasniqi, A, Maes, L, Vandenbrande, C, Sterckx, YG, Stijlemans, B, Vincke, C, Devoogdt, N, Muyldermans, S. Identification of Nanobodies against the Acute Myeloid Leukemia Marker CD33 Int J Mol Sci 21, 310, 2020. (Epub 2020 Jan 2)
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Saeys, Y, Finak, G. Special Issue on Machine Learning for Single Cell Data Cytometry A 97, 217-218, 2020. (Epub 2020 Mar 6)
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Sanchez-Fernandez, A, Romero, L, Peralta, D, Medina-Perez, M, Saeys, Y, Herrera, F, Tabik, S. Asynchronous Processing for Latent Fingerprint Identification on Heterogeneous CPU-GPU Systems IEEE Access 8, 124236–124253, 2020. (Epub 2020 Jun 29)
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Savvides, SN, Elewaut, D. Small-molecule inhibitors get pro-inflammatory TNF into shape Nat Rev Rheumatol 16, 189-190, 2020. (Epub 2020 Feb 14)
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Scherger, M, Bolli, E, Pombo Antunes, AR, Arnouk, S, Stickdorn, J, Van Driessche, A, Schild, H, Grabbe, S, De Geest, BG, Van Ginderachter, JA, Nuhn, L. Transient Multivalent Nanobody Targeting to CD206-Expressing Cells via PH-Degradable Nanogels Cells 9, E2222, 2020. (Epub 2020 Oct 1)
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Schoonvaere, K, Brunain, M, Baeke, F, De Bruyne, M, De Rycke, R, de Graaf, DC. Comparison between Apicystis cryptica sp. n. and Apicystis bombi (Arthrogregarida, Apicomplexa): Gregarine parasites that cause fat body hypertrophism in bees Eur J Protistol 73, 125688, 2020. (Epub 2020 Feb 21)
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Seo, J, Seong, D, Nam, YW, Hwang, CH, Lee, SR, Lee, CS, Jin, Y, Lee, HW, Oh, DB, Vandenabeele, P, Song, J. Beclin 1 functions as a negative modulator of MLKL oligomerisation by integrating into the necrosome complex Cell Death Differ 27, 3065-3081, 2020. (Epub 2020 May 26)
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Seong, D, Jeong, M, Seo, J, Lee, JY, Hwang, CH, Shin, HC, Shin, JY, Nam, YW, Jo, JY, Lee, H, Kim, HJ, Kim, HR, Oh, JH, Ha, SJ, Kim, SJ, Roe, JS, Kim, W, et al., Vandenabeele, P , et al.. Identification of MYC as an antinecroptotic protein that stifles RIPK1-RIPK3 complex formation Proc Natl Acad Sci U S A 117, 19982-19993, 2020. (Epub 2020 Aug 04)
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Shemer, A, Scheyltjens, I, Frumer, GR, Kim, JS, Grozovski, J, Ayanaw, S, Dassa, B, Van Hove, H, Chappell-Maor, L, Boura-Halfon, S, Leshkowitz, D, Mueller, W, Maggio, N, Movahedi, K, Jung, S. Interleukin-10 Prevents Pathological Microglia Hyperactivation following Peripheral Endotoxin Challenge Immunity 53, 1033-1049 e7, 2020. (Epub 2020 Oct 12)
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Simpson, J, Loh, Z, Ullah, MA, Lynch, JP, Werder, RB, Collinson, N, Zhang, V, Dondelinger, Y, Bertrand, MJM, Everard, ML, Blyth, CC, Hartel, G, Van Oosterhout, AJ, Gough, PJ, Bertin, J, Upham, JW, Spann, KM, Phipps, S. RSV Infection Promotes Necroptosis and HMGB1 Release by Airway Epithelial Cells Am J Respir Crit Care Med 201, 1358-1371, 2020. (Epub 2020 Feb 27)
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Slowicka, K, Petta, I, Blancke, G, Hoste, E, Dumas, E, Sze, M, Vikkula, H, Radaelli, E, Haigh, J, Jonckheere, S, Taminau, J, Vandamme, N, Wullaert, A, Tulchinsky, E, Nittner, D, Van Vlierberghe, P, De Hertogh, G, Baldin, P, Etlioglu, E, et al. Berx, G, Vereecke, L, van Loo,G. Zeb2 drives invasive and microbiota-dependent colon carcinoma Nature Cancer 1, 620-634, 2020. (Epub 2020 Jun 15)
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Souffriau, J, Timmermans, S, Vanderhaeghen, T, Wallaeys, C, Van Looveren, K, Aelbrecht, L, Dewaele, S, Vandewalle, J, et al., Eggermont, M, De Rycke, R, De Bruyne, M, Ballegeer, M, Vandevyver, S, Hochepied, T, Beyaert, R, Libert, C. Zinc inhibits lethal inflammatory shock by preventing microbe-induced interferon signature in intestinal epithelium EMBO Mol Med , e11917, 2020. (Epub 2020 Sep 11)
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Sprooten, J, De Wijngaert, P, Vanmeerbeerk, I, Martin, S, Vangheluwe, P, Schlenner, S, Krysko, DV, Parys, JB, Bultynck, G, Vandenabeele, P, Garg, AD. Necroptosis in Immuno-Oncology and Cancer Immunotherapy Cells 9, 1823, 2020. (Epub 2020 Aug 01)
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Staal, J. Fytohormonen : verschillende bioactieve moleculen die metabolisme en ontsteking beïnvloeden in de mens Bloedvaten, Hart, Longen 25, 32 - 35, 2020. (Epub 2020)
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Stijlemans, B, Korf, H, De Baetselier, P, Brys, L, Van Ginderachter, JA, Magez, S, De Trez, C. Hepatocyte-derived IL-10 plays a crucial role in attenuating pathogenicity during the chronic phase of T. congolense infection PLoS Pathog 16, e1008170, 2020. (Epub 2020 Feb 3)
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Teufelberger, AR, Van Nevel, S, Hulpiau, P, Nordengrun, M, Savvides, SN, De Graeve, S, Akula, S, Holtappels, G, De Ruyck, N, Declercq, W, Vandenabeele, P, Hellman, L, Broker, BM, Krysko, DV, Bachert, C, Krysko, O. Mouse Strain-Dependent Difference Toward the Staphylococcus aureus Allergen Serine Protease-Like Protein D Reveals a Novel Regulator of IL-33 Front Immunol 11, 582044, 2020. (Epub 2020 Sep 25)
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Thyssen, JP, Jakasa, I, Riethmuller, C, Schon, MP, Braun, A, Haftek, M, Fallon, PG, Wroblewski, J, Jakubowski, H, Eckhart, L, Declercq, W, Koppes, S, Engebretsen, KA, Bonefeld, C, Irvine, AD, Keita-Alassane, S, Simon, M, Kawasaki, H, Kubo, A, et al.. Filaggrin Expression and Processing Deficiencies Impair Corneocyte Surface Texture and Stiffness in Mice J Invest Dermatol 140, 615-623, 2020. (Epub 2019 Aug 31)
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Tipanee, J, Di Matteo, M, Tulalamba, W, Samara-Kuko, E, Keirsse, J, Van Ginderachter, JA, Chuah, MK, VandenDriessche, T. Validation of miR-20a as a Tumor Suppressor Gene in Liver Carcinoma Using Hepatocyte-Specific Hyperactive piggyBac Transposons Mol Ther Nucleic Acids 19, 1309-1329, 2020. (Epub 2020 Mar 6)
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Todorov, H, Cannoodt, R, Saelens, W, Saeys, Y. TinGa: fast and flexible trajectory inference with Growing Neural Gas Bioinformatics 36, i66-i74, 2020. (Epub 2020 Jul 1)
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Tougaard, P, Martinsen, LO, Lutzhoft, DO, Jensen, HE, Flethoj, M, Vandenabeele, P, Pedersen, AE, Skov, S, Hansen, AK, Hansen, CHF. TL1A regulates adipose-resident innate lymphoid immune responses and enables diet-induced obesity in mice Int J Obes (Lond) 44, 1062-1074, 2020. (Epub 2020 Jan 30)
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Trocha, KM, Kip, P, Tao, M, MacArthur, MR, Trevino-Villarreal, H, Longchamp, A, Toussaint, W, Lambrecht, BN, de Vries, MR, Quax, PHA, Mitchell, JR, Ozaki, CK. Short-Term Preoperative Protein Restriction Attenuates Vein Graft Disease via Induction of Cystathionine Upsilon-Lyase Cardiovasc Res 116, 416–428, 2020. (Epub 2019 Mar 29)
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Van Coillie, S, Wiernicki, B, Xu, J. Molecular and Cellular Functions of CTLA-4 Adv Exp Med Biol 1248, 7-32, 2020. (Epub 2020 Mar 18)
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Vandaele, R, Nervo, GA, Gevaert, O. Topological image modification for object detection and topological image processing of skin lesions Sci Rep 10, 21061, 2020. (Epub 2020 Dec 3)
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Vandaele, R, Saeys, Y, De Bie, T. Mining Topological Structure in Graphs through Forest Representations Journal of Machine Learning Research 21, 1-68, 2020. (Epub Oct 2020)
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Van Damme, KFA, Tavernier, S, Van Roy, N, De Leeuw, E, Declercq, J, Bosteels, C, Maes, B, De Bruyne, M, Bogaert, D, Bosteels, V, Hoste, L, Naesens, L, Maes, P, Grifoni, A, Weiskopf, D, Sette, A, Depuydt, P, Van Braeckel, E, Haerynck, F, et al.. Case Report: Convalescent Plasma, a Targeted Therapy for Patients with CVID and Severe COVID-19 Front Immunol 11, 596761, 2020. (Epub 2020 Nov 20)
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