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Piron, R, Santens, F, De Paepe, A, Depicker, A, Callewaert, N.
Using GlycoDelete to produce proteins lacking plant-specific N-glycan modification in seeds
Nat Biotechnol 33, 1135-1137, 2015. (Epub 2015 Nov 6)

Puimege, L, Van Hauwermeiren, F, Steeland, S, Van Ryckeghem, S, Vandewalle, J, Lodens, S, Dejager, L, Vandevyver, S, Staelens, J, Timmermans, S, Vandenbroucke, RE, Libert, C.
Glucocorticoid-induced microRNA-511 protects against TNF by down-regulating TNFR1
EMBO Mol Med 7, 1004-1017, 2015. (Epub 2015 May 20)

Ramboer, E, De Craene, B, De Kock, J, Berx, G, Rogiers, V, Vanhaecke, T, Vinken, M.
Development and chararcterization of a new human hepatic cell line
Excli Journal 14, 875-889, 2015. (Epub 2015 Jul 28)

Rampazzo, A, Calore, M, van Hengel, J, van Roy, F.
Intercalated discs and arrhythmogenic cardiomyopathy
Circ Cardiovasc Genet 7, 930-940, 2015. (Epub 2014 Dec 7)

Robinson, PC, Costello, ME, Leo, P, Bradbury, LA, Hollis, K, Cortes, A, Lee, S, Joo, KB, Shim, SC, Weisman, M, Ward, M, Zhou, X, Garchon, HJ, Chiocchia, G, Nossent, J, Lie, BA, Forre, O, Tuomilehto, J, Laiho, K, et al..
ERAP2 is associated with ankylosing spondylitis in HLA-B27-positive and HLA-B27-negative patients
Ann Rheum Dis 74, 1627-U209, 2015. (Epub 2015 Apr 27)

Sabaghian, E, Drebert, Z, Inze, D, Saeys, Y.
An integrated network of Arabidopsis growth regulators and its use for gene prioritization
Sci Rep 5, 17617, 2015. (Epub 2015 Dec 1)

Saveljeva, S, Mc Laughlin, SL, Vandenabeele, P, Samali, A, Bertrand, MJ.
Endoplasmic reticulum stress induces ligand-independent TNFR1-mediated necroptosis in L929 cells
Cell Death Dis 6, e1587, 2015. (Epub 2015 Jan 8)

Schepens, B, Schotsaert, M, Saelens, X.
Small hydrophobic protein of respiratory syncytial virus as a novel vaccine antigen
Immunotherapy 7, 3, 2015. (Epub 2015 Mar)

Schepers, E, Houthuys, E, Dhondt, A, De Meyer, G, Neirynck, N, Bernaert, P, Van den Bergh, R, Brouckaert, P, Vanholder, R, Glorieux, G.
Transcriptome Analysis in Patients with Chronic Kidney Disease on Hemodialysis Disclosing a Key Role for CD16+CX3CR1+ Monocytes
PLoS One 40, e0121750, 2015. (Epub 2015 Apr 1)

Schuijs, MJ, Willart, MA, Vergote, K, Gras, D, Deswarte, K, Ege, MJ, Branco Madeira, F, Beyaert, R, van Loo, G, Bracher, F, von Mutius, E, Chanez, P, Lambrecht, BN, Hammad, H.
Farm dust and endotoxin protect against allergy through A20 induction in lung epithelial cells
Science 349, 1106-1110, 2015. (Epub 2015 Sep 4)

Schulz, S, Chisholm, KM, Zhao, H, Kalish, F, Yang, Y, Wong, RJ, Stevenson, DK.
Heme oxygenase-1 confers protection and alters T cell populations in a mouse model of neonatal intestinal inflammation
Pediatr Res 77, 640-648, 2015. (Epub 2015 Feb 9)

Seys, LJ, Verhamme, FM, Schinwald, A, Hammad, H, Cunoosamy, DM, Bantsimba-Malanda, C, Sabirsh, A, McCall, E, Flavell, L, Herbst, R, Provoost, S, Lambrecht, BN, Joos, GF, Brusselle, GG, Bracke, KR.
Role of B Cell Activating Factor (BAFF) in Chronic Obstructive Pulmonary Disease
Am J Respir Crit Care Med 192, 706-718, 2015. (Epub 2015 Aug 12)

Singh, P, Dejager, L, Amand, M, Theatre, E, Vandereyken, M, Zurashvili, T, Singh, M, Mack, M, Timmermans, S, Musumeci, L, Dejardin, E, Mustelin, T, Van Ginderachter, JA, Moutschen, M, Oury, C, Libert, C, Rahmouni, S.
DUSP3 Genetic Deletion Confers M2-like Macrophage-Dependent Tolerance to Septic Shock
J Immunol 194, 4951-4962, 2015. (Epub 2015 Apr 15)

Sipieter, F, Cappe, B, Gonzalez Pisfil, M, Spriet, C, Bodart, JF, Cailliau-Maggio, K, Vandenabeele, P, Heliot, L, Riquet, FB.
Novel Reporter for Faithful Monitoring of ERK2 Dynamics in Living Cells and Model Organisms
PLoS One 10, e0140924, 2015. (Epub 2015 Oct 30)

Sklyarova, T, van Hengel, J, Van Wonterghem, E, Libert, C, van Roy, F, Vandenbroucke, RE.
Hematopoietic plakophilin-3 regulates acute tissue-specific and systemic inflammation in mice
Eur J Immunol 45, 2898-2910, 2015. (Epub 2015 Jul 14)

Soderholm, S, Anastasina, M, Islam, MM, Tynell, J, Poranen, MM, Bamford, DH, Stenman, J, Julkunen, I, Sauliene, I, De Brabander, JK, Matikainen, S, Nyman, TA, Saelens, X, Kainov, D.
Immuno-modulating properties of saliphenylhalamide, SNS-032, obatoclax, and gemcitabine
Antiviral Res 126, 69-80, 2015. (Epub 2015 Dec 29)

Song, J, Feng, Y, Acke, FR, Coucke, P, Vleminckx, K, Dhooge, IJ.
Hearing loss in Waardenburg syndrome: a systematic review
Clin Genet 89, 416-425, 2015. (Epub 2015 Jun 22)

Sundahl, N, Bridelance, J, Libert, C, De Bosscher, K, Beck, IM.
Selective glucocorticoid receptor modulation: New directions with non-steroidal scaffolds
Pharmacol Ther 152, 28-41, 2015. (Epub 2015 May 6)

Symoens, S, Barnes, AM, Gistelinck, C, Malfait, F, Guillemyn, B, Steyaert, W, Syx, D, D'Hondt, S, Biervliet, M, De Backer, J, Witten, EP, Leikin, S, Makareeva, E, Gillessen-Kaesbach, G, Huysseune, A, Vleminckx, K, Willaert, A, De Paepe, A, Marini, JC, et al..
Genetic Defects in TAPT1 Disrupt Ciliogenesis and Cause a Complex Lethal Osteochondrodysplasia
Am J Hum Genet 97, 521-534, 2015. (Epub 2015 Oct 1)

Terawaki, S, Camosseto, V, Prete, F, Wenger, T, Papadopoulos, A, Rondeau, C, Combes, A, Rodriguez Rodrigues, C, Vu Manh, TP, Fallet, M, English, L, Santamaria, R, Soares, AR, Weil, T, Hammad, H, Desjardins, M, Gorvel, JP, Santos, MA, Gatti, E, et al..
RUN and FYVE domain-containing protein 4 enhances autophagy and lysosome tethering in response to Interleukin-4
J Cell Biol 210, 1133-1152, 2015. (Epub 2015 Sep 28)

Testa, R, Vanhooren, V, Bonfigli, AR, Boemi, M, Olivieri, F, Ceriello, A, Genovese, S, Spazzafumo, L, Borelli, V, Bacalini, MG, Salvioli, S, Garagnani, P, Dewaele, S, Libert, C, Franceschi, C.
N-glycomic changes in serum proteins in type 2 diabetes mellitus correlate with complications and with metabolic syndrome parameters
PLoS One 10, e0119983, 2015. (Epub 2015 Mar 20)

Thoonen, R, Cauwels, A, Decaluwe, K, Geschka, S, Tainsh, RE, Delanghe, J, Hochepied, T, De Cauwer, L, Rogge, E, Voet, S, Sips, P, Karas, RH, Bloch, KD, Vuylsteke, M, Stasch, JP, Van de Voorde, J, Buys, ES, Brouckaert, P.
Cardiovascular and pharmacological implications of haem-deficient NO-unresponsive soluble guanylate cyclase knock-in mice
Nat Commun 6, 8482, 2015. (Epub 2015 Oct 7)

Timmermans, S, Van Hauwermeiren, F, Puimege, L, Dejager, L, Van Wonterghem, E, Vanhooren, V, Mestdagh, P, Libert, C, Vandenbroucke, RE.
Determining differentially expressed miRNAs and validating miRNA-target relationships using the SPRET/Ei mouse strain
Mamm Genome 26, 94-107, 2015. (Epub 2014 Dec 10)

Triguero, I, del Rio, S, López, V, Bacardit, J, Benítez, JM, Herrera, F.
ROSEFW-RF: The winner algorithm for the ECBDL’14 big data competition: An extremely imbalanced big data bioinformatics problem
Knowledge-Based Systems 87, 69-79, 2015. (Epub 2015 Jun 1)

Triguero, I, Galar, M, Vluymans, S, Cornelis, C, Bustince, H, Herrera, F, Saeys, Y.
Evolutionary Undersampling for Imbalanced Big Data Classification
Conference paper EEE Congress on Evolutionary Computation (CEC) , 715-722, 2015. (Epub 2015)

Tyteca, D, Nishino, T, Debaix, H, Van Der Smissen, P, N'Kuli, F, Hoffmann, D, Cnops, Y, Rabolli, V, van Loo, G, Beyaert, R, Huaux, F, Devuyst, O, Courtoy, PJ.
Regulation of macrophage motility by the water channel aquaporin-1: crucial role of m0/m2 phenotype switch
PLoS One 10, e0117398, 2015. (Epub 2015 Feb 26)

Urwyler, O, Izadifar, A, Dascenco, D, Petrovic, M, He, H, Ayaz, D, Kremer, A, Lippens, S, Baatsen, P, Guerin, CJ, Schmucker, D.
Investigating CNS synaptogenesis at single-synapse resolution by combining reverse genetics with correlative light and electron microscopy
Development 142, 394-405, 2015. (Epub 2015 Jan 15)

Vanden Berghe, T, Hulpiau, P, Martens, L, Vandenbroucke, RE, Van Wonterghem, E, Perry, SW, Bruggeman, I, Divert, T, Choi, SM, Vuylsteke, M, Shestopalov, VI, Libert, C, Vandenabeele, P.
Passenger Mutations Confound Interpretation of All Genetically Modified Congenic Mice
Immunity 43, 200-209, 2015. (Epub 2015 Jul 21)

Vanden Berghe, T, Kaiser, WJ, Bertrand, MJ, Vandenabeele, P.
Molecular crosstalk between apoptosis, necroptosis, and survival signaling
Mol Cell Oncol 2, e975093, 2015. (Epub 2015 Apr 8)

Vanden Berghe, T, Linkermann, A.
Take my breath away: necrosis in kidney transplants kills the lungs!
Kidney Intl 87, 680-682, 2015. (Epub 2015 APr)

Van den Bossche, J, Laoui, D, Naessens, T, Smits, HH, Hokke, CH, Stijlemans, B, Grooten, J, De Baetselier, P, Van Ginderachter, JA.
E-cadherin expression in macrophages dampens their inflammatory responsiveness in vitro, but does not modulate M2-regulated pathologies in vivo
Sci Rep 5, 12599, 2015. (Epub 2015 Jul 31)

Van den Hoecke, S, Verhelst, J, Vuylsteke, M, Saelens, X.
Analysis of the genetic diversity of influenza A viruses using next-generation DNA sequencing
BMC Genomics 16, , 2015. (Epub 2015 Feb 14)

Vandermeulen, G, Vanvarenberg, K, De Beuckelaer, A, De Koker, S, Lambricht, L, Uyttenhove, C, Reschner, A, Vanderplasschen, A, Grooten, J, Preat, V.
The site of administration influences both the type and the magnitude of the immune response induced by DNA vaccine electroporation
Vaccine 28, 3179-3185, 2015. (Epub 2015 May 14)

Van der Meulen, J, Sanghvi, V, Mavrakis, K, Durinck, K, Fang, F, Matthijssens, F, Rondou, P, Rosen, M, Pieters, T, Vandenberghe, P, Delabesse, E, Lammens, T, De Moerloose, B, Menten, B, Van Roy, N, Verhasselt, B, Poppe, B, Benoit, Y, Taghon, T, et al..
The H3K27me3 demethylase UTX is a gender-specific tumor suppressor in T-cell acute lymphoblastic leukemia
Blood 125, 13-21, 2015. (Epub 2014 Oct 15)

Vandewalle, K, Festjens, N, Plets, E, Vuylsteke, M, Saeys, Y, Callewaert, N.
Characterization of genome-wide ordered sequence-tagged Mycobacterium mutant libraries by Cartesian Pooling-Coordinate Sequencing
Nat Commun 6, 7106, 2015. (Epub 2015 May 11)

Van Gassen, S, Callebaut, B, Van Helden, MJ, Lambrecht, BN, Demeester, P, Dhaene, T, Saeys, Y.
FlowSOM: Using self-organizing maps for visualization and interpretation of cytometry data
Cytom Part A 87A, 636-645, 2015. (Epub 2015 Jan 8)

van Helden, MJ, Goossens, S, Daussy, C, Mathieu, AL, Faure, F, Marcais, A, Vandamme, N, Farla, N, Mayol, K, Viel, S, Degouve, S, Debien, E, Seuntjens, E, Conidi, A, Chaix, J, Mangeot, P, de Bernard, S, Buffat, L, Haigh, JJ, et al..
Terminal NK cell maturation is controlled by concerted actions of T-bet and Zeb2 and is essential for melanoma rejection
J Exp Med 212, 2015-2025, 2015. (Epub 2015 Oct 26)

Vanhooren, V, Santos, AN, Voutetakis, K, Petropoulos, I, Libert, C, Simm, A, Gonos, ES, Friguet, B.
Protein modification and maintenance systems as biomarkers of ageing
Mech Ageing Dev 151, 71-84, 2015. (Epub 2015 Apr 3)

Van Nieuwenhuysen, T, Naert, T, Tran, HT, Van Imschoot, G, Geurs, S, Sanders, E, Creytens, D, Van Roy, F, Vleminckx, K.
TALEN-mediated apc mutation in Xenopus tropicalis phenocopies familial adenomatous polyposis
Oncoscience 2, 555-566, 2015. (Epub 2015 May 19)

Van Overbeke, W, Wongsantichon, J, Everaert, I, Verhelle, A, Zwaenepoel, O, Loonchanta, A, Burtnick, LD, De Ganck, A, Hochepied, T, Haigh, J, Cuvelier, C, Derave, W, Robinson, RC, Gettemans, J.
An ER-directed gelsolin nanobody targets the first step in amyloid formation in a gelsolin amyloidosis mouse model
Hum Mol Genet 24, 2492-507, 2015. (Epub 2015 May 1)

Van Praet, JT, Donovan, E, Vanassche, I, Drennan, MB, Windels, F, Dendooven, A, Allais, L, Cuvelier, CA, van de Loo, F, Norris, PS, Kruglov, AA, Nedospasov, SA, Rabot, S, Tito, R, Raes, J, Gaboriau-Routhiau, V, Cerf-Bensussan, N, Van de Wiele, T, Eberl, G, et al..
Commensal microbiota influence systemic autoimmune responses
EMBO J 34, 466-74, 2015. (Epub 2015 Feb 12)

Vanwalleghem, G, Fontaine, F, Lecordier, L, Tebabi, P, Klewe, K, Nolan, DP, Yamaryo-Botte, Y, Botte, C, Kremer, A, Burkard, GS, Rassow, J, Roditi, I, Perez-Morga, D, Pays, E.
Coupling of lysosomal and mitochondrial membrane permeabilization in trypanolysis by APOL1
Nat Commun 6, 8078, 2015. (Epub 2015 Aug 26)

Venken, K, Elewaut, D.
IL-23 responsive innate-like T cells in spondyloarthritis: the less frequent they are, the more vital they appear
Curr Rheumatol Rep 17, 30, 2015. (Epub 2015 April 15)

Venken, K, Elewaut, D.
New immune cells in spondyloarthritis: Key players or innocent bystanders?
Best Pract Res Clin Rheumatol 29, 706-714, 2015. (Epub 2015 Dec)

Vens, C, Van Gassen, S, Dhaene, T, Saeys, Y.
Complex Aggregates over Clusters of Elements
Lecture Notes in Artificial Intelligence 9046, 181-193, 2015. (Epub 2015)

Vercruyssen, L, Tognetti, VB, Gonzalez, N, Van Dingenen, J, De Milde, L, Bielach, A, De Rycke, R, Van Breusegem, F, Inze, D.
GROWTH REGULATING FACTOR5 Stimulates Arabidopsis Chloroplast Division, Photosynthesis, and Leaf Longevity
Plant Physiology 167, 817-832, 2015. (Epub 2015 Mar)

Verhelst, J, De Vlieger, D, Saelens, X.
Co-immunoprecipitation of the Mouse Mx1 Protein with the Influenza A Virus Nucleoprotein
J Vis Exp 98, e52871, 2015. (Epub 2015 Apr 21)

Verhelst, J, Spitaels, J, Nurnberger, C, De Vlieger, D, Ysenbaert, T, Staeheli, P, Fiers, W, Saelens, X.
Functional comparison of Mx1 from two different mouse species reveals the involvement of loop L4 in the antiviral activity against influenza A viruses
J Virol 89, 10879-10890, 2015. (Epub 2015 Aug 19)

Verhelst, K, Gardam, S, Borghi, A, Kreike, M, Carpentier, I, Beyaert, R.
XEDAR activates the non-canonical NF-kappaB pathway
Biochem Biophys Res Commun 465, 275-280, 2015. (Epub 2015 Aug 7)

Vermeire, T, Vermaere, S, Schepens, B, Saelens, X, Van Gucht, S, Martens, L, Vandermarliere, E.
Scop3D: Three-dimensional visualization of sequence conservation
Proteomics 15, 1448-1452, 2015. (Epub 2015 Jan 31)

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