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Selected IRC publications

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El Yakoubi, W, Borday, C, Hamdache, J, Parain, K, Tran, HT, Vleminckx, K, Perron, M, Locker, M.
Hes4 controls proliferative properties of neural stem cells during retinal ontogenesis
Stem Cells 30, 2784-2795, 2012. (Epub 2012 Sep 11)

Emeagi, PU, Van Lint, S, Goyvaerts, C, Maenhout, S, Cauwels, A, McNeish, IA, Bos, T, Heirman, C, Thielemans, K, Aerts, JL, Breckpot, K.
Proinflammatory characteristics of SMAC/DIABLO-induced cell death in antitumor therapy
Cancer Res 72, 1342-1352, 2012. (Epub 2012 Feb 29)

Feraru, E, Feraru, MI, Asaoka, R, Paciorek, T, De Rycke, R, Tanaka, H, Nakano, A, Friml, J.
BEX5/RabA1b Regulates trans-Golgi Network-to-Plasma Membrane Protein Trafficking in Arabidopsis
Plant Cell 24, 3074-3086, 2012. (Epub 2012 Jul)

Fierens, K, Kool, M.
The mechanism of adjuvanticity of aluminium-containing formulas
Curr Pharm Des 18, 2305-2313, 2012. (Epub 2012)

Francis, I, De Keyser, A, De Backer, P, Simon-Mateo, C, Kalkus, J, Pertry, I, Ardiles-Diaz, W, De Rycke, R, Vandeputte, OM, El Jaziri, M, Holsters, M, Vereecke, D.
pFiD188, the Linear Virulence Plasmid of Rhodococcus fascians D188
Molecular Plant-Microbe Interactions 25, 637-647, 2012. (Epub 2012 May)

Galle, M, Carpentier, I, Beyaert, R.
Structure and function of the Type III secretion system of Pseudomonas aeruginosa
Curr Protein Pept Sci 13, 831-842, 2012. (Epub 2012 Dec 10)

Galle, M, Jin, S, Bogaert, P, Haegman, M, Vandenabeele, P, Beyaert, R.
The Pseudomonas aeruginosa type III secretion system has an exotoxin S/T/Y independent pathogenic role during acute lung infection
PLoS One 7, e41547, 2012. (Epub 2012 Jul 23)

Galluzzi, L, Vitale, I, Abrams, JM, Alnemri, ES, Baehrecke, EH, Blagosklonny, MV, Dawson, TM, Dawson, VL, El-Deiry, WS, Fulda, S, Gottlieb, E, Green, DR, Hengartner, MO, Kepp, O, Knight, RA, Kumar, S, Lipton, SA, Lu, X, Madeo, F, Malorni, W, Mehlen, P, Nunez, G, Peter, ME, Piacentini, M, Rubinsztein, DC, Shi, Y, Simon, HU, Vandenabeele, P, White, E, Yuan, J, Zhivotovsky, B, Melino, G, Kroemer, G.
Molecular definitions of cell death subroutines: recommendations of the Nomenclature Committee on Cell Death 2012
Cell Death Differ 19, 107-120, 2012. (Epub 2011 Jul 15)

Garg, AD, Kaczmarek, A, Krysko, O, Vandenabeele, P, Krysko, DV, Agostinis, P.
ER stress-induced inflammation: does it aid or impede disease progression?
Trends Mol Med 18, 589-598, 2012. (Epub 2012 Aug 7)

Garg, AD, Krysko, DV, Vandenabeele, P, Agostinis, P.
Hypericin-based photodynamic therapy induces surface exposure of damage-associated molecular patterns like HSP70 and calreticulin
Cancer Immunol Immunother 61, 215-221, 2012. (Epub 2011 Dec 23)

Garg, AD, Krysko, DV, Vandenabeele, P, Agostinis, P.
The emergence of phox-ER stress induced immunogenic apoptosis
Oncoimmunology 1, 786-788, 2012. (Epub 2012 Aug 1)

Garg, AD, Krysko, DV, Verfaillie, T, Kaczmarek, A, Ferreira, GB, Marysael, T, Rubio, N, Firczuk, M, Mathieu, C, Roebroek, AJM, Annaert, W, Golab, J, de Witte, P, Vandenabeele, P, Agostinis, P.
A novel pathway combining calreticulin exposure and ATP secretion in immunogenic cancer cell death
EMBO J 31, 1062-1079, 2012. (Epub 2012 Jan 17)

Gembarska, A, Luciani, F, Fedele, C, Russell, EA, Dewaele, M, Villar, S, Zwolinska, A, Haupt, S, de Lange, J, Yip, D, Goydos, J, Haigh, JJ, Haupt, Y, Larue, L, Jochemsen, A, Shi, H, Moriceau, G, Lo, RS, Ghanem, G, Shackleton, M, Bernal, F, Marine, JC.
MDM4 is a key therapeutic target in cutaneous melanoma
Nat Med 18, 1239-1247, 2012. (Epub 2012 Jul 22)

Gheldof, A, Hulpiau, P, van Roy, F, De Craene, B, Berx, G.
Evolutionary functional analysis and molecular regulation of the ZEB transcription factors
Cell Mol Life Sci 69, 2527-2541, 2012. (Epub 2012 Feb 21)

Goossens, S, Haigh, JJ.
The role of EMT modulators in hematopoiesis and leukemic transformation
In Hematology - Science and Practice. (Lawrie, C, ed.), Rijeka, InTech, pp. 101-120, 2012. (Epub 2012 Mar)

Grespi, F, Amelio, I, Tucci, P, Annicchiarico-Petruzzelli, M, Melino, G.
Tissue-specific expression of p73 C-terminal isoforms in mice
Cell Cycle 11, 4474-4483, 2012. (Epub 2012 Nov 16)

Grespi, F, Melino, G.
P73 and age-related diseases: is there any link with Parkinson Disease?
Aging (Albany NY) 4, 923-931, 2012. (Epub 2012 Dec 18)

Hashemi, H, Pouyanfard, S, Bandehpour, M, Noroozbabaei, Z, Kazemi, B, Saelens, X, Mokhtari-Azad, T.
Immunization with M2e-displaying T7 bacteriophage nanoparticles protects against influenza A virus challenge
PLoS One 7, e45765, 2012. (Epub 2012 Sep 24)

Himanen, K, Boccardi, TM, De Rycke, R, Odeny, OP, Van Lijsebettens, M.
Is HUB1 a hub for plant fitness?
Plant Signaling & Behavious 7, 1537-1540, 2012. (Epub 2012 Dec)

Hooghe, B, Broos, S, van Roy, F, De Bleser, P.
A flexible integrative approach based on random forest improves prediction of transcription factor binding sites
Nucleic Acids Res 40, e106, 2012. (Epub 2012 Apr 5)

Icardi, L, Mori, R, Gesellchen, V, Eyckerman, S, De Cauwer, L, Verhelst, J, Vercauteren, K, Saelens, X, Meuleman, P, Leroux-Roels, G, De Bosscher, K, Boutros, M, Tavernier, J.
The Sin3a repressor complex is a master regulator of STAT transcriptional activity
Proc Natl Acad Sci USA 109, 12058-12063, 2012. (Epub 2012 Jul 10)

Inoue, M, Williams, KL, Oliver, T, Vandenabeele, P, Rajan, JV, Miao, EA, Shinohara, ML.
Interferon-beta therapy against EAE is effective only when development of the disease depends on the NLRP3 inflammasome
Sci Signal 5, ra38, 2012. (Epub 2012 May 22)

Jager, R, Bertrand, MJ, Gorman, AM, Vandenabeele, P, Samali, A.
The unfolded protein response at the crossroads of cellular life and death during ER stress
Biol Cell 104, 259-270, 2012. (Epub 2012 Jan 23)

Jansen, L, Roberts, I, De Rycke, R, Beeckman, T.
Phloem-associated auxin response maxima determine radial positioning of lateral roots in maize
Philosophical Transactions of the Royal Society B-Biological Sciences 367, 1525-1533, 2012. (Epub 2012 Apr 23)

Jouan-Lanhouet, S, Arshad, MI, Piquet-Pellorce, C, Martin-Chouly, C, Le Moigne-Muller, G, Van Herreweghe, F, Takahashi, N, Sergent, O, Lagadic-Gossmann, D, Vandenabeele, P, Samson, M, Dimanche-Boitrel, MT.
TRAIL induces necroptosis involving RIPK1/RIPK3-dependent PARP-1 activation
Cell Death Differ 19, 2003-2014, 2012. (Epub 2012 Jul 20)

Kaczmarek, A, Brinkman, BM, Heyndrickx, L, Vandenabeele, P, Krysko, DV.
Severity of doxorubicin-induced small intestinal mucositis is regulated by the TLR-2 and TLR-9 pathways
J Pathol 226, 598-608, 2012. (Epub 2011 Sep 29)

Kleiman, A, Hubner, S, Rodriguez Parkitna, JM, Neumann, A, Hofer, S, Weigand, MA, Bauer, M, Schmid, W, Schütz, G, Libert, C, Reichardt, HM, Tuckermann, JP.
Glucocorticoid receptor dimerization is required for survival in septic shock via suppression of Interleukin-1 in macrophages
FASEB J 26, 722-729, 2012. (Epub 2011 Oct 31)

Klionsky, DJ, Abdalla, FC, Abeliovich, H, (...), Vandenabeele, P, (...), Zuckerbraun, B, (1234 authors).
Guidelines for the use and interpretation of assays for monitoring autophagy
Autophagy 8, 445-544, 2012. (Epub 2012 Apr)

Kool, M, Hammad, H, Lambrecht, BN.
Cellular networks controlling Th2 polarization in allergy and immunity
F1000 Biol Rep 4, 6, 2012. (Epub 2012 Mar 1)

Krysko, DV.
Immunogenic cell death and emission of Damps: Calreticulin and ATP
J Nanomed Biotherapeut Discov 2, 1000e118, 2012. (Epub 2012)

Krysko, DV, Garg, AD, Kaczmarek, A, Agostinis, P, Vandenabeele, P.
Immunogenic cell death and DAMPs in cancer therapy
Nat Rev Cancer 12, 860-875, 2012. (Epub 2012 Nov 15)

Lambrecht, BN, Hammad, H.
Lung dendritic cells in respiratory viral infection and asthma: from protection to immunopathology
Annu Rev Immunol 30, 243-270, 2012. (Epub 2012 Jan 3)

Lambrecht, BN, Hammad, H.
The airway epithelium in asthma
Nat Med 18, 684-692, 2012. (Epub 2012 May 4)

Li, J, Goossens, S, van Hengel, J, Gao, E, Cheng, L, Tyberghein, K, Shang, X, De Rycke, R, van Roy, F, Radice, G.
Loss of alpha-T-catenin alters the hybrid adhering junctions in the heart and leads to dilated cardiomyopathy and ventricular arrhythmia following acute ischemia
J Cell Sci 125, 1058-1067, 2012. (Epub 2012 Mar 15)

Loeder, S, Schirmer, M, Schoeneberger, H, Cristofanon, S, Leibacher, J, Vanlangenakker, N, Bertrand, MJ, Vandenabeele, P, Jeremias, I, Debatin, KM, Fulda, S.
RIP1 is required for IAP inhibitor-mediated sensitization of childhood acute leukemia cells to chemotherapy-induced apoptosis
Leukemia 26, 1020-1029, 2012. (Epub 2011 Dec 16)

Lucitti, JL, Mackey, JK, Morrison, JC, Haigh, JJ, Adams, RH, Faber, JE.
Formation of the collateral circulation is regulated by Vascular Endothelial Growth Factor-A and a disintegrin and metalloprotease family members 10 and 17
Circ Res 111, 1539-1550, 2012. (Epub 2012 Sep 10)

Maddens, B, Vandendriessche, B, Demon, D, Vanholder, R, Chiers, K, Cauwels, A, Meyer, E.
Severity of sepsis-induced acute kidney injury in a novel mouse model is age dependent
Crit Care Med 40, 2638-2646, 2012. (Epub 2012 Jun 28)

Maelfait, J, Beyaert, R.
Emerging role of ubiquitination in antiviral RIG-I signaling
Microbiol Mol Biol Rev 76, 33-45, 2012. (Epub 2012 Mar)

Maelfait, J, Roose, K, Bogaert, P, Sze, M, Saelens, X, Pasparakis, M, Carpentier, I, van Loo, G, Beyaert, R.
A20 (Tnfaip3) deficiency in myeloid cells protects against Influenza A virus infection
PLoS Pathog 8, e1002570, 2012. (Epub 2012 Mar 1)

Maes, C, Araldi, E, Haigh, K, Khatri, R, Van Looveren, R, Giaccia, AJ, Haigh, JJ, Carmeliet, G, Schipani, E.
VEGF-independent cell-autonomous functions of HIF-1alpha regulating oxygen consumption in fetal cartilage are critical for chondrocyte survival
J Bone Miner Res 27, 596-609, 2012. (Epub 2011 Dec 8)

Matalova, E, Vanden Berghe, T, Svandova, E, Vandenabeele, P, Healy, C, Sharpe, PT, Tucker, AS.
Caspase-7 in molar tooth development
Arch Oral Biol 57, 1474-1481, 2012. (Epub 2012 Aug 31)

Mengozzi, M, Cervellini, I, Villa, P, Erbayraktar, Z, Gokmen, N, Yilmaz, O, Erbayraktar, S, Manohasandra, M, Van Hummelen, P, Vandenabeele, P, Chernajovsky, Y, Annenkov, A, Ghezzi, P.
Erythropoietin-induced changes in brain gene expression reveal induction of synaptic plasticity genes in experimental stroke
Proc Natl Acad Sci USA 109, 9617-9622, 2012. (Epub 2012 May 29)

Miguez, A, Ducret, S, Di Meglio, T, Parras, C, Hmidan, H, Haton, C, Sekizar, S, Manniou, A, Vidal, M, Keveler, A, Nyabi, O, Haigh, J, Zalc, B, Rijli, F, Thomas, J-L.
Opposing roles for Hoxa2 and Hoxb2 in hindbrain oligodendrocyte patterning
J Neurosci 32, 17172-17185, 2012. (Epub 2012 Nov 28)

Munoz, WA, Kloc, M, Cho, K, Lee, M, Hofmann, I, Sater, A, Vleminckx, K, McCrea, PD.
Plakophilin-3 is required for late embryonic amphibian development, exhibiting roles in ectodermal and neural tissues
PLoS One 7, e34342, 2012. (Epub 2012 Apr 5)

Naessens, T, Vander Beken, S, Bogaert, P, Van Rooijen, N, Lienenklaus, S, Weiss, S, De Koker, S, Grooten, J.
Innate imprinting of murine resident alveolar macrophages by allergic bronchial inflammation causes a switch from hypo- to hyperinflammatory reactivity
Am J Pathol 181, 174-184, 2012. (Epub 2012 May 18)

Nagels, B, Van Damme, EJ, Callewaert, N, Weterings, K.
Introduction of tri-antennary N-glycans in Arabidopsis thaliana plants
Plant Sci 185-186, 161-168, 2012. (Epub 2011 Oct 10)

Nagels, B, Van Damme, EJ, Callewaert, N, Zabeau, L, Tavernier, J, Delanghe, JR, Boets, A, Castilho, A, Weterings, K.
Biologically active, MagnICON(R)-expressed EPO-Fc from stably transformed Nicotiana benthamiana plants presenting tetra-antennary N-glycan structures
J Biotechnol 160, 242-250, 2012. (Epub 2012 Mar 16)

Nagels, B, Weterings, K, Callewaert, N, Van Damme, EJM.
Production of plant made pharmaceuticals: from plant host to functional protein
Crit Rev Plant Sci 31, 148-180, 2012. (Epub 2012 Mar 8)

Neyt, K, Perros, F, Geurtsvankessel, CH, Hammad, H, Lambrecht, BN.
Tertiary lymphoid organs in infection and autoimmunity
Trends Immunol 33, 297-305, 2012. (Epub 2012 May 21)

Nunez, NG, Andreani, V, Crespo, MI, Nocera, DA, Breser, ML, Moron, G, Dejager, L, Libert, C, Rivero, V, Maccioni, M.
IFN beta produced by TLR4-activated tumor cells is involved in improving the antitumoral immune response
Cancer Res 72, 592-603, 2012. (Epub 2011 Dec 2)

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