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Selected IRC publications

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Ackaert, C, Smiejkowska, N, Xavier, C, Sterckx, YGJ, Denies, S, Stijlemans, B, Elkrim, Y, Devoogdt, N, Caveliers, V, Lahoutte, T, Muyldermans, S, Breckpot, K, Keyaerts, M.
Immunogenicity Risk Profile of Nanobodies
Front Immunol 12, 632687, 2021. (Epub 2021 Mar 9)

Ackermann, M, Anders, HJ, Bilyy, R, Bowlin, GL, Daniel, C, De Lorenzo, R, Egeblad, M, Henneck, T, Hidalgo, A, Hoffmann, M, Hohberger, B, Kanthi, Y, Kaplan, MJ, Knight, JS, Knopf, J, Kolaczkowska, E, Kubes, P, Leppkes, M, Mahajan, A, et al..
Patients with COVID-19: in the dark-NETs of neutrophils
Cell Death Differ , in press, 2021. (Epub 2021 May 24)

Adami, V, Homer, N, Utz, N, Lippens, S, Rappoport, JZ, Fernandez-Rodriguez, J.
An international survey of Training Needs and Career Paths of Core Facility Staff
J Biomol Tech 32, 1-9, 2021. (Epub 2020 Nov 20)

Aegerter, H, Smole, U, Heyndrickx, I, Verstraete, K, Savvides, SN, Hammad, H, Lambrecht, BN.
Charcot-Leyden crystals and other protein crystals driving type 2 immunity and allergy
Curr Opin Immunol 72, 72-78, 2021. (Epub 2021 Apr 16)

Afonina, IS, Van Nuffel, E, Beyaert, R.
Immune responses and therapeutic options in psoriasis
Cell Mol Life Sci 78, 27092727, 2021. (Epub 2021 Jan 2)

Aguilera-Lizarraga, J, Florens, MV, Viola, MF, Jain, P, Decraecker, L, Appeltans, I, Cuende-Estevez, M, Fabre, N, Van Beek, K, Perna, E, Balemans, D, Stakenborg, N, Theofanous, S, Bosmans, G, Mondelaers, SU, Matteoli, G, Ibiza Martinez, S, Lopez-Lopez, C, Jaramillo-Polanco, J, et al..
Local immune response to food antigens drives meal-induced abdominal pain
Nature 590, 151-156, 2021. (Epub 2021 Jan 13)

Almeida, L, Dhillon-LaBrooy, A, Castro, CN, Adossa, N, Carriche, GM, Guderian, M, Lippens, S, Dennerlein, S, Hesse, C, Lambrecht, BN, Berod, L, Schauser, L, Blazar, BR, Kalesse, M, Muller, R, Moita, LF, Sparwasser, T.
Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Immunity 54, 68-83, 2021. (Epub 2020 Nov 24)

Backers, L, Parton, B, De Bruyne, M, Tavernier, SJ, Van Den Bogaert, K, Lambrecht, BN, Haerynck, F, Claes, KBM.
Missing heritability in Bloom syndrome: First report of a deep intronic variant leading to pseudo-exon activation in the BLM gene
Clin Genet 99, 292-297, 2021. (Epub 2020 Oct 9)

Baptista, AP, Gerner, MY.
Lymphoid stromal cells proGrem dendritic cell homeostasis
Nat Immunol 22, 541-543, 2021. (Epub 2021 Apr 26)

Baraliakos, X, Van den Bosch, F, Machado, PM, Gensler, LS, Marzo-Ortega, H, Sherif, B, Quebe-Fehling, E, Porter, B, Gaillez, C, Deodhar, A.
Achievement of Remission Endpoints with Secukinumab Over 3 Years in Active Ankylosing Spondylitis: Pooled Analysis of Two Phase 3 Studies
Rheumatol Ther 8, 273-288, 2021. (Epub 2020 Dec 22)

Baudhuin, H, Cousaert, J, Vanwolleghem, P, Raes, G, Caveliers, V, Keyaerts, M, Lahoutte, T, Xavier, C.
(68)Ga-Labeling: Laying the Foundation for an Anti-Radiolytic Formulation for NOTA-sdAb PET Tracers
Pharmaceuticals (Basel) 14, 448, 2021. (Epub 2021 May 10)

Baudhuin, H, Puttemans, J, Hanssens, H, Vanwolleghem, P, Hernot, S, Raes, G, Xavier, C, Lahoutte, T, Debie, P.
Decorating sdAbs with Chelators: Effect of Conjugation on Biodistribution and Functionality
Pharmaceuticals (Basel) 14, 407, 2021. (Epub 2021 Apr 25)

Baudhuin, H, Van Bockstal, PJ, De Beer, T, Vaneycken, I, Bridoux, J, Raes, G, Caveliers, V, Keyaerts, M, Devoogdt, N, Lahoutte, T, Xavier, C.
Lyophilization of NOTA-sdAbs: first step towards a cold diagnostic kit for (68)Ga-labeling
Eur J Pharm Biopharm , in press, 2021. (Epub 2021 Jun 26)

Bolli, E, Scherger, M, Arnouk, SM, Pombo Antunes, AR, Strassburger, D, Urschbach, M, Stickdorn, J, De Vlaminck, K, Movahedi, K, Rader, HJ, Hernot, S, Besenius, P, Van Ginderachter, JA, Nuhn, L.
Targeted Repolarization of Tumor-Associated Macrophages via Imidazoquinoline-Linked Nanobodies
Adv Sci (Weinh) 8, 2004574, 2021. (Epub 2021 Mar 8)

Borras-Tuduri, R, Alcaide, A, Aspeslag, S, Usero, L, Serra, C, Roura-Mir, C, Elewaut, D, Llebaria, A.
New paradigm in NKT cell antigens: MCS-0208 (2-(Hydroxymethyl)phenylthio-phytoceramide) an aryl-phytoceramide compound with a single hydroxyl group stimulates NKT cells
ChemMedChem 16, in press, 2021. (Epub 2021 Apr 6)

Bosteels, C, Fierens, K, De Prijck, S, Van Moorleghem, J, Vanheerswynghels, M, De Wolf, C, Chalon, A, Collignon, C, Hammad, H, Didierlaurent, AM, Lambrecht, BN.
CCR2- and Flt3-Dependent Inflammatory Conventional Type 2 Dendritic Cells Are Necessary for the Induction of Adaptive Immunity by the Human Vaccine Adjuvant System AS01
Front Immunol 11, 606805, 2021. (Epub 2021 Jan 14)

Brightling, C, Kulkarni, S, Lambrecht, BN, Sandham, D, Weiss, M, Altman, P.
The pharmacology of the prostaglandin D2 receptor 2 (DP2) receptor antagonist, fevipiprant
Pulm Pharmacol Ther 68, 102030, 2021. (Epub 2021 Apr 4)

Cannoodt, R, Saelens, W, Deconinck, L, Saeys, Y.
Spearheading future omics analyses using dyngen, a multi-modal simulator of single cells
Nat Commun 12, 3942, 2021. (Epub 2021 Jun 24)

Carbo, JM, Leon, TE, Font-Diaz, J, De la Rosa, JV, Castrillo, A, Picard, FR, Staudenraus, D, Huber, M, Cedo, L, Escola-Gil, JC, Campos, L, Bakiri, L, Wagner, EF, Caelles, C, Stratmann, T, Van Ginderachter, JA, Valledor, AF.
Pharmacological activation of LXR alters the expression profile of tumor-associated macrophages and the abundance of regulatory T cells in the tumor microenvironment
Cancer Res 81, 968-985, 2021. (Epub 2020 Dec 23)

Cloots, E, Simpson, MS, De Nolf, C, Lencer, WI, Janssens, S, Grey, MJ.
Evolution and function of the epithelial cell-specific ER stress sensor IRE1beta
Mucosal Immunol , in press, 2021. (Epub 2021 Jun 1)

Coornaert, I, Puylaert, P, Marcasolli, G, Grootaert, MOJ, Vandenabeele, P, De Meyer, GRY, Martinet, W.
Impact of myeloid RIPK1 gene deletion on atherogenesis in ApoE-deficient mice
Atherosclerosis 322, 51-60, 2021. (Epub 2021 Feb 24)

de Haan, W, Dheedene, W, Apelt, K, Decombas-Deschamps, S, Vinckier, S, Verhulst, S, Conidi, A, Deffieux, T, Staring, MW, Vandervoort, P, Caluwe, E, Lox, M, Mannaerts, I, Takagi, T, Jaekers, J, Berx, G, Haigh, J, Topal, B, Zwijsen, A, et al..
Endothelial Zeb2 preserves the hepatic angioarchitecture and protects against liver fibrosis
Cardiovasc Res , in press, 2021. (Epub 2021 Apr 28)

Delaney, C, Farrell, M, Doherty, CP, Brennan, K, O'Keeffe, E, Greene, C, Byrne, K, Kelly, E, Birmingham, N, Hickey, P, Cronin, S, Savvides, SN, Doyle, SL, Campbell, M.
Attenuated CSF-1R signalling drives cerebrovascular pathology
EMBO Mol Med 13, e12889, 2021. (Epub 2020 Dec 22)

De Schutter, E, Roelandt, R, Riquet, FB, Van Camp, G, Wullaert, A, Vandenabeele, P.
Punching Holes in Cellular Membranes: Biology and Evolution of Gasdermins
Trends Cell Biol 31, 500-513, 2021. (Epub 2021 Mar 23)

Desmet, S, Saeys, Y, Verstaen, K, Dauwe, R, Kim, H, Niculaes, C, Fukushima, A, Goeminne, G, Vanholme, R, Ralph, J, Boerjan, W, Morreel, K.
Maize specialized metabolome networks reveal organ-preferential mixed glycosides
Comput Struct Biotechnol J 19, 1127-1144, 2021. (Epub 2021 jan 26)

De Spiegeleer, A, Van Migerode, J, Bronselaer, A, Wynendaele, E, Peelman, M, Vandaele, F, Byttebier, G, De Tre, G, Belmans, L, Van De Wiele, C, Sathekge, M, Van Dijck, D, Saxberg, B, Alexander, M, Fedson, D, Elewaut, D, Van Den Noortgate, N, De Spiegeleer, B.
Statin Intake and All-Cause Mortality among Older Nursing Home Residents
Gerontology , in press, 2021. (Epub 2021 Jun 16)

de Vlam, K, Steinfeld, S, Toukap, AN, van den Bosch, F, Joos, R, Geussens, P, Leroi, H, Lories, R, Investigators, BS.
The burden of psoriatic arthritis in the biological era: data from the Belgian Epidemiological Psoriatic Arthritis Study (BEPAS)
Rheumatology (Oxford) , in press, 2021. (Epub 2021 Mar 12)

Dhont, S, Derom, E, Van Braeckel, E, Depuydt, P, Lambrecht, BN.
Conceptions of the pathophysiology of happy hypoxemia in COVID-19
Respir Res 22, 12, 2021. (Epub 2021 Jan 8)

Duetz, C, Van Gassen, S, Westers, TM, van Spronsen, MF, Bachas, C, Saeys, Y, van de Loosdrecht, AA.
Computational flow cytometry as a diagnostic tool in suspected-myelodysplastic syndromes
Cytometry A , in press, 2021. (Epub 2021 May 3)

Fleischmann, RM, Blanco, R, Hall, S, Thomson, GTD, Van den Bosch, FE, Zerbini, C, Bessette, L, Enejosa, J, Li, Y, Song, Y, DeMasi, R, Song, IH.
Switching between Janus kinase inhibitor upadacitinib and adalimumab following insufficient response: efficacy and safety in patients with rheumatoid arthritis
Ann Rheum Dis 80, 432-439, 2021. (Epub 2020 Nov 4)

Geisberger, S, Bartolomaeus, H, Neubert, P, Willebrand, R, Zasada, C, Bartolomaeus, T, McParland, V, Swinnen, D, Geuzens, A, Maifeld, A, Krampert, L, Vogl, M, Mahler, A, Wilck, N, Marko, L, Tilic, E, Forslund, SK, Binger, KJ, Stegbauer, J, et al..
Salt Transiently Inhibits Mitochondrial Energetics in Mononuclear Phagocytes
Circulation , in press, 2021. (Epub 2021 Apr 28)

Germanova, D, Keirsse, J, Kohler, A, Hastir, JF, Demetter, P, Delbauve, S, Elkrim, Y, Verset, L, Larbanoix, L, Preyat, N, Laurent, S, Nedospasov, S, Donckier, V, Van Ginderachter, JA, Flamand, V.
Myeloid TNF and HO-1 regulate the progression of colorectal liver metastases during hepatic ischemia-reperfusion
Int J Cancer 148, 12761288, 2021. (Epub 2020 Oct 10)

Gola, A, Dorrington, MG, Speranza, E, Sala, C, Shih, RM, Radtke, AJ, Wong, HS, Baptista, AP, Hernandez, JM, Castellani, G, Fraser, IDC, Germain, RN.
Commensal-driven immune zonation of the liver promotes host defence
Nature 589, 131-136, 2021. (Epub 2020 Nov 25)

Gorle, N, Bauwens, E, Haesebrouck, F, Smet, A, Vandenbroucke, RE.
Helicobacter and the Potential Role in Neurological Disorders: There Is More Than Helicobacter pylori
Front Immunol 11, 584165, 2021. (Epub 2021 Jan 28)

Guggino, G, Mauro, D, Rizzo, A, Alessandro, R, Raimondo, S, Bergot, AS, Rahman, MA, Ellis, JJ, Milling, S, Lories, R, Elewaut, D, Brown, MA, Thomas, R, Ciccia, F.
Inflammasome activation in Ankylosing Spondylitis is associated to gut dysbiosis
Arthritis Rheumatol 73, 1189-1199, 2021. (Epub 2021 Jan 16)

Guilliams, M, Svedberg, FR.
Does tissue imprinting restrict macrophage plasticity?
Nat Immunol 22, 118-127, 2021. (Epub 2021 Jan 18)

Gurumurthy, CB, O'Brien, AR, Quadros, RM, Adams, J, Jr., Alcaide, P, Ayabe, S, Ballard, J, Batra, SK, Beauchamp, MC, Becker, KA, Bernas, G, Brough, D, Carrillo-Salinas, F, Chan, W, Chen, H, Dawson, R, DeMambro, V, D'Hont, J, Dibb, K, et al..
Response to correspondence on "Reproducibility of CRISPR-Cas9 methods for generation of conditional mouse alleles: a multi-center evaluation"
Genome Biol 22, 99, 2021. (Epub 2021 Apr 7)

Hammad, H, Lambrecht, BN.
The basic immunology of asthma
Cell 184, 1469-1485, 2021. (Epub 2021 Mar 18)

Harizaj, A, Van Hauwermeiren, F, Stremersch, S, De Rycke, R, De Keersmaecker, H, Brans, T, Fraire, JC, Grauwen, K, De Smedt, SC, Lentacker, I, Lamkanfi, M, Braeckmans, K.
Nanoparticle-sensitized photoporation enables inflammasome activation studies in targeted single cells
Nanoscale 13, 6592-6604, 2021. (Epub 2021 Mar 26)

Heine, H, Adanitsch, F, Peternelj, TT, Haegman, M, Kasper, C, Ittig, S, Beyaert, R, Jerala, R, Zamyatina, A.
Tailored Modulation of Cellular Pro-inflammatory Responses With Disaccharide Lipid A Mimetics
Front Immunol 12, 631797, 2021. (Epub 2021 Mar 18)

Huang, X, Ferris, ST, Kim, S, Choudhary, MNK, Belk, JA, Fan, C, Qi, Y, Sudan, R, Xia, Y, Desai, P, Chen, J, Ly, N, Shi, Q, Bagadia, P, Liu, T, Guilliams, M, Egawa, T, Colonna, M, Diamond, MS, et al..
Differential usage of transcriptional repressor Zeb2 enhancers distinguishes adult and embryonic hematopoiesis
Immunity 54, 1-16, 2021. (Epub 2021 May 11)

Huppertsberg, A, Kaps, L, Zhong, Z, Schmitt, S, Stickdorn, J, Deswarte, K, Combes, F, Czysch, C, De Vrieze, J, Kasmi, S, Choteschovsky, N, Klefenz, A, Medina-Montano, C, Winterwerber, P, Chen, C, Bros, M, Lienenklaus, S, Sanders, NN, Koynov, K, et al..
Squaric Ester-Based, pH-Degradable Nanogels: Modular Nanocarriers for Safe, Systemic Administration of Toll-like Receptor 7/8 Agonistic Immune Modulators
J Am Chem Soc , in press, 2021. (Epub 2021 Jun 24)

Jangra, S, De Vrieze, J, Choi, A, Rathnasinghe, R, Laghlali, G, Uvyn, A, Van Herck, S, Nuhn, L, Deswarte, K, Zhong, Z, Sanders, N, Lienenklaus, S, David, S, Strohmeier, S, Amanat, F, Krammer, F, Hammad, H, Lambrecht, BN, Coughlan, L, et al..
Sterilizing Immunity against SARS-CoV-2 Infection in Mice by a Single-Shot and Lipid Amphiphile Imidazoquinoline TLR7/8 Agonist-Adjuvanted Recombinant Spike Protein Vaccine
Angew Chem Int Ed Engl 60, 9467-9473, 2021. (Epub 2021 Jan 19)

Jans, LBO, Chen, M, Elewaut, D, Van den Bosch, F, Carron, P, Jacques, P, Wittoek, R, Jaremko, JL, Herregods, N.
MRI-based Synthetic CT in the Detection of Structural Lesions in Patients with Suspected Sacroiliitis: Comparison with MRI
Radiology 298, 343-349, 2021. (Epub 2020 Dec 22)

Jonckheere, S, Adams, J, De Groote, D, Campbell, K, Berx, G, Goossens, S.
Epithelial-Mesenchymal Transition (EMT) as a Therapeutic Target
Cells Tissues Organs , 1-26, 2021. (Epub 2021 Jan 5)

Kananen, L, Enroth, L, Raitanen, J, Jylhava, J, Burkle, A, Moreno-Villanueva, M, Bernhardt, J, Toussaint, O, Grubeck-Loebenstein, B, Malavolta, M, Basso, A, Piacenza, F, Collino, S, Gonos, ES, Sikora, E, Gradinaru, D, Jansen, E, Dolle, MET, Salmon, M, et al..
Self-rated health in individuals with and without disease is associated with multiple biomarkers representing multiple biological domains
Sci Rep 11, 6139, 2021. (Epub 2021 Mar 17)

Kelley, SM, Ravichandran, KS.
Putting the brakes on phagocytosis: "don't-eat-me" signaling in physiology and disease
EMBO Rep 22, e52564, 2021. (Epub 2021 May 27)

Kim, JS, Kolesnikov, M, Peled-Hajaj, S, Scheyltjens, I, Xia, Y, Trzebanski, S, Haimon, Z, Shemer, A, Lubart, A, Van Hove, H, Chappell-Maor, L, Boura-Halfon, S, Movahedi, K, Blinder, P, Jung, S.
A Binary Cre Transgenic Approach Dissects Microglia and CNS Border-Associated Macrophages
Immunity 54, 176-190, 2021. (Epub 2020 Dec 16)

Kiss, M, Vande Walle, L, Saavedra, PHV, Lebegge, E, Van Damme, H, Murgaski, A, Qian, J, Ehling, M, Pretto, S, Bolli, E, Keirsse, J, Bardet, PMR, Arnouk, SM, Elkrim, Y, Schmoetten, M, Brughmans, J, Debraekeleer, A, Fossoul, A, Boon, L, et al..
IL1beta Promotes Immune Suppression in the Tumor Microenvironment Independent of the Inflammasome and Gasdermin D
Cancer Immunol Res 9, 309-323, 2021. (Epub 2020 Dec 23)

Klionsky, DJ, Abdel-Aziz, AK, Abdelfatah, S, Abdellatif, M, Abdoli, A, Abel, S, Abeliovich, H, Abildgaard, MH, Abudu, YP, Acevedo-Arozena, A, Adamopoulos, IE, Adeli, K, Adolph, TE, Adornetto, A, Aflaki, E, Agam, G, Agarwal, A, Aggarwal, BB, Agnello, M, et al..
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)
Autophagy 1, 1-382, 2021. (Epub 2021 Feb 8)

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