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Ghazavi, F, Huysentruyt, J, De Coninck, J, Kourula, S, Martens, S, Hassannia, B, Wartewig, T, Divert, T, Roelandt, R, Popper, B, Hiergeist, A, Tougaard, P, Vanden Berghe, T, Joossens, M, Berx, G, Takahashi, N, Wahida, A, Vandenabeele, P.
Executioner caspases 3 and 7 are dispensable for intestinal epithelium turnover and homeostasis at steady state
Proc Natl Acad Sci U S A 119, e2024508119, 2022. (Epub 2022 Feb 8)

Ginhoux, F, Guilliams, M, Merad, M.
Expanding dendritic cell nomenclature in the single-cell era
Nat Rev Immunol 22, 67-68, 2022. (Epub 2022 Jan 13)

Goossens, E, Li, J, Callens, C, Van Rysselberghe, N, Kettunen, H, Vuorenmaa, J, Garcia Gonzalez, N, Libert, C, Ducatelle, R, Van Immerseel, F.
Acute Endotoxemia-Induced Respiratory and Intestinal Dysbiosis
Int J Mol Sci 23, 11602, 2022. (Epub 2022 Oct 1)

Gros, M, Segura, E, Rookhuizen, DC, Baudon, B, Heurtebise-Chretien, S, Burgdorf, N, Maurin, M, Kapp, EA, Simpson, RJ, Kozik, P, Villadangos, JA, Bertrand, MJM, Burbage, M, Amigorena, S.
Endocytic membrane repair by ESCRT-III controls antigen export to the cytosol during antigen cross-presentation
Cell Rep 40, 111205, 2022. (Epub 2022 Aug 16)

Guilliams, M, Bonnardel, J, Haest, B, Vanderborght, B, Wagner, C, Remmerie, A, Bujko, A, Martens, L, Thone, T, Browaeys, R, De Ponti, FF, Vanneste, B, Zwicker, C, Svedberg, FR, Vanhalewyn, T, Goncalves, A, Lippens, S, Devriendt, B, Cox, E, et al..
Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches
Cell 185, 379-396, 2022. (Epub 2022 Jan 22)

Guilliams, M, Scott, CL.
Liver macrophages in health and disease
Immunity 55, 1515-1529, 2022. (Epub 2023 Sep 13)

Gurke, R, Bendes, A, Bowes, J, Koehm, M, Twyman, RM, Barton, A, Elewaut, D, Goodyear, C, Hahnefeld, L, Hillenbrand, R, Hunter, E, Ibberson, M, Ioannidis, V, Kugler, S, Lories, RJ, Resch, E, Ruping, S, Scholich, K, Schwenk, JM, et al..
Omics and Multi-Omics Analysis for the Early Identification and Improved Outcome of Patients with Psoriatic Arthritis
Biomedicines 10, 2387, 2022. (Epub 2022 Sep 24)

Hadadi, E, Deschoemaeker, S, Vicente Venegas, G, Laoui, D.
Heterogeneity and function of macrophages in the breast during homeostasis and cancer
Int Rev Cell Mol Biol 367, 149-182, 2022. (Epub 2022 Feb 28)

Hamad, I, Cardilli, A, Corte-Real, BF, Dyczko, A, Vangronsveld, J, Kleinewietfeld, M.
High-Salt Diet Induces Depletion of Lactic Acid-Producing Bacteria in Murine Gut
Nutrients 14, 1171, 2022. (Epub 2022 Mar 10)

Hammad, H, Debeuf, N, Aegerter, H, Brown, AS, Lambrecht, BN.
Emerging Paradigms in Type 2 Immunity
Annu Rev Immunol 40, 443-467, 2022. (Epub 2022 Apr 26)

Han, Y, Villarreal-Ponce, A, Gutierrez, G, Jr., Nguyen, Q, Sun, P, Wu, T, Sui, B, Berx, G, Brabletz, T, Kessenbrock, K, Zeng, YA, Watanabe, K, Dai, X.
Coordinate control of basal epithelial cell fate and stem cell maintenance by core EMT transcription factor Zeb1
Cell Rep 38, 110240, 2022. (Epub 2022 Jan 11)

Hobin, K, Costas-Rodriguez, M, Van Wonterghem, E, Vandenbroucke, RE, Vanhaecke, F.
High-Precision Isotopic Analysis of Cu and Fe via Multi-Collector Inductively Coupled Plasma-Mass Spectrometry Reveals Lipopolysaccharide-Induced Inflammatory Effects in Blood Plasma and Brain Tissues
Front Chem 10, 896279, 2022. (Epub 2022 Jun 15)

Hoste, L, Roels, L, Naesens, L, Bosteels, V, Vanhee, S, Dupont, S, Bosteels, C, Browaeys, R, Vandamme, N, Verstaen, K, Roels, J, Van Damme, KFA, Maes, B, De Leeuw, E, Declercq, J, Aegerter, H, Seys, L, Smole, U, De Prijck, S, et al..
TIM3+ TRBV11-2 T cells and IFNgamma signature in patrolling monocytes and CD16+ NK cells delineate MIS-C
J Exp Med 219, e20211381, 2022. (Epub 2021 Dec 16)

Hua, Y, Vella, G, Rambow, F, Allen, E, Antoranz Martinez, A, Duhamel, M, Takeda, A, Jalkanen, S, Junius, S, Smeets, A, Nittner, D, Dimmeler, S, Hehlgans, T, Liston, A, Bosisio, FM, Floris, G, Laoui, D, Hollmen, M, Lambrechts, D, et al..
Cancer immunotherapies transition endothelial cells into HEVs that generate TCF1(+) T lymphocyte niches through a feed-forward loop
Cancer Cell 40, 1600-1618, 2022. (Epub 2022 Nov 23)

Huyghe, J, Priem, D, Van Hove, L, Gilbert, B, Fritsch, J, Uchiyama, Y, Hoste, E, van Loo, G, Bertrand, MJM.
ATG9A prevents TNF cytotoxicity by an unconventional lysosomal targeting pathway
Science 378, 1201-1207, 2022. (Epub 2022 Dec 16)

Hu, Y, Hudson, WH, Kissick, HT, Medina, CB, Baptista, AP, Ma, C, Liao, W, Germain, RN, Turley, SJ, Zhang, N, Ahmed, R.
TGF-beta regulates the stem-like state of PD-1+ TCF-1+ virus-specific CD8 T cells during chronic infection
J Exp Med 219, e20211574, 2022. (Epub 2022 Aug 18)

Ichim, G, Gibert, B, Adriouch, S, Brenner, C, Davoust, N, Desagher, S, Devos, D, Dokudovskaya, S, Dubrez, L, Estaquier, J, Gillet, G, Guenal, I, Juin, PP, Kroemer, G, Legembre, P, Levayer, R, Manon, S, Mehlen, P, Meurette, O, et al..
Keeping Cell Death Alive: An Introduction into the French Cell Death Research Network
Biomolecules 12, 901, 2022. (Epub 2022 Jun 28)

Ji, F, Ren, J, Vincke, C, Jia, L, Muyldermans, S.
Nanobodies: From Serendipitous Discovery of Heavy Chain-Only Antibodies in Camelids to a Wide Range of Useful Applications
Methods Mol Biol 2446, 3-17, 2022. (Epub 2022 Feb 14)

Jonckheere, S, Adams, J, De Groote, D, Campbell, K, Berx, G, Goossens, S.
Epithelial-Mesenchymal Transition (EMT) as a Therapeutic Target
Cells Tissues Organs 211, 157-182, 2022. (Epub 2021 Jan 5)

Kananen, L, Hurme, M, Burkle, A, Moreno-Villanueva, M, Bernhardt, J, Debacq-Chainiaux, F, Grubeck-Loebenstein, B, Malavolta, M, Basso, A, Piacenza, F, Collino, S, Gonos, ES, Sikora, E, Gradinaru, D, Jansen, E, Dolle, MET, Salmon, M, Stuetz, W, Weber, D, et al..
Circulating cell-free DNA in health and disease - the relationship to health behaviours, ageing phenotypes and metabolomics
Geroscience , in press, 2022. (Epub 2022 Jul 21)

Karras, P, Bordeu, I, Pozniak, J, Nowosad, A, Pazzi, C, Van Raemdonck, N, Landeloos, E, Van Herck, Y, Pedri, D, Bervoets, G, Makhzami, S, Khoo, JH, Pavie, B, Lamote, J, Marin-Bejar, O, Dewaele, M, Liang, H, Zhang, X, Hua, Y, et al..
A cellular hierarchy in melanoma uncouples growth and metastasis
Nature 610, 190-198, 2022. (Epub 2022 Sep 21)

Kiltz, U, Boonen, A, van der Heijde, D, Bautista-Molano, W, Vargas, RB, Chiowchanwisawakit, P, El-Zorkany, B, Gaydukova, I, Geher, P, Gossec, L, Gilio, M, Grazio, S, Gu, J, Khan, MA, Kim, TJ, Maksymowych, WP, Marzo-Ortega, H, Navarro-Compan, V, Ozgocmen, S, et al..
Development of an environmental contextual factor item set relevant to global functioning and health in patients with axial Spondyloarthritis
Rheumatology (Oxford) 61, 2054-2062, 2022. (Epub 2021 Sep 17)

Kim, SW, Alci, K, Van Gaever, F, Driege, Y, Bicalho, K, Goeminne, G, Libert, C, Goossens, A, Beyaert, R, Staal, J.
Engineering a highly sensitive biosensor for abscisic acid in mammalian cells
FEBS Lett , in press, 2022. (Epub 2022 Jun 21)

Kiss, M, Lebegge, E, Murgaski, A, Van Damme, H, Kancheva, D, Brughmans, J, Scheyltjens, I, Talebi, A, Awad, RM, Elkrim, Y, Bardet, PMR, Arnouk, SM, Goyvaerts, C, Swinnen, J, Nana, FA, Van Ginderachter, JA, Laoui, D.
Junctional adhesion molecule-A is dispensable for myeloid cell recruitment and diversification in the tumor microenvironment
Front Immunol 13, 1003975, 2022. (Epub 2022 Dec 1)

Kleinberger, I, Sanders, E, Staes, K, Van Troys, M, Hirano, S, Hochepied, T, Lemeire, K, Martens, L, Ampe, C, van Roy, F.
Innovative mouse models for the tumor suppressor activity of Protocadherin-10 isoforms
BMC Cancer 22, 451, 2022. (Epub 2022 Apr 25)

Kos, K, Aslam, MA, van de Ven, R, Wellenstein, MD, Pieters, W, van Weverwijk, A, Duits, DEM, van Pul, K, Hau, CS, Vrijland, K, Kaldenbach, D, Raeven, EAM, Quezada, SA, Beyaert, R, Jacobs, H, de Gruijl, TD, de Visser, KE.
Tumor-educated Tregs drive organ-specific metastasis in breast cancer by impairing NK cells in the lymph node niche
Cell Rep 38, 110447, 2022. (Epub 2022 Mar 1)

Krabbe, S, Renson, T, Jans, L, Elewaut, D, Van den Bosch, F, Carron, P, Ostergaard, M.
Performance of an MRI scoring system for inflammation of joints and entheses in peripheral SpA: post-hoc analysis of the CRESPA trial
Rheumatology (Oxford) , in press, 2022. (Epub 2022 Oct 6)

Kroeze, A, van Hoeven, V, Verheij, MW, Turksma, AW, Weterings, N, van Gassen, S, Zeerleder, SS, Blom, B, Voermans, C, Hazenberg, MD.
Presence of innate lymphoid cells in allogeneic hematopoietic grafts correlates with reduced graft-versus-host disease
Cytotherapy 24, 302-310, 2022. (Epub 2022 Jan 17)

Lippens, S, Audenaert, D, Botzki, A, Derveaux, S, Ghesquiere, B, Goeminne, G, Hassanzadeh, R, Haustraete, J, Impens, F, Lamote, J, Munck, S, Vandamme, N, Van Isterdael, G, Lein, M, Van Minnebruggen, G.
How tech-savvy employees make the difference in core facilities: Recognizing core facility expertise with dedicated career tracks: Recognizing core facility expertise with dedicated career tracks
EMBO Rep 23, e55094, 2022. (Epub 2022 Jun 7)

Liu, KE, Raymond, MH, Ravichandran, KS, Kucenas, S.
Clearing Your Mind: Mechanisms of Debris Clearance After Cell Death During Neural Development
Annu Rev Neurosci 45, 177-198, 2022. (Epub 2022 Feb 28)

Loers, JU, Vermeirssen, V.
SUBATOMIC: a SUbgraph BAsed mulTi-OMIcs clustering framework to analyze integrated multi-edge networks
BMC Bioinformatics 23, 363, 2022. (Epub 2022 Sep 5)

Lorent, N, Vande Weygaerde, Y, Claeys, E, Guler Caamano Fajardo, I, De Vos, N, De Wever, W, Salhi, B, Gyselinck, I, Bosteels, C, Lambrecht, BN, Everaerts, S, Verschraegen, S, Schepers, C, Demeyer, H, Heyns, A, Depuydt, P, Oeyen, S, Van Bleyenbergh, P, Godinas, L, et al..
Prospective longitudinal evaluation of hospitalised COVID-19 survivors 3 and 12 months after discharge
ERJ Open Res 8, 00004-2022, 2022. (Epub 2022 Apr 11)

Loret, N, Vandamme, N, De Coninck, J, Taminau, J, De Clercq, K, Blancke, G, Jonckheere, S, Goossens, S, Lemeire, K, De Prijck, S, Verstaen, K, Seurinck, R, Van Dorpe, J, Weyers, S, Denys, H, Van de Vijver, K, Lambrecht, BN, Tummers, P, Saeys, Y, et al..
Distinct transcriptional programs in ascitic and solid cancer cells induce different responses to chemotherapy in high-grade serous ovarian cancer
Mol Cancer Res 20, 1532-1547, 2022. (Epub 2022 Jun 24)

Lucas, CD, Medina, CB, Bruton, FA, Dorward, DA, Raymond, MH, Tufan, T, Etchegaray, JI, Barron, B, Oremek, MEM, Arandjelovic, S, Farber, E, Onngut-Gumuscu, S, Ke, E, Whyte, MKB, Rossi, AG, Ravichandran, KS.
Pannexin 1 drives efficient epithelial repair after tissue injury
Sci Immunol 7, eabm4032, 2022. (Epub 2022 May 13)

Luquette, LJ, Miller, MB, Zhou, Z, Bohrson, CL, Zhao, Y, Jin, H, Gulhan, D, Ganz, J, Bizzotto, S, Kirkham, S, Hochepied, T, Libert, C, Galor, A, Kim, J, Lodato, MA, Garaycoechea, JI, Gawad, C, West, J, Walsh, CA, et al..
Single-cell genome sequencing of human neurons identifies somatic point mutation and indel enrichment in regulatory elements
Nat Genet 54, 1564-1571, 2022. (Epub 2022 Sep 26)

Maes, B, Smole, U, Vanderkerken, M, Deswarte, K, Van Moorleghem, J, Vergote, K, Vanheerswynghels, M, De Wolf, C, De Prijck, S, Debeuf, N, Pavie, B, Toussaint, W, Janssens, S, Savvides, S, Lambrecht, BN, Hammad, H.
The STE20 kinase TAOK3 controls the development house dust mite-induced asthma in mice
J Allergy Clin Immunol 149, 1413-1427, 2022. (Epub 2021 Sep 8)

Maifeld, A, Wild, J, Karlsen, TV, Rakova, N, Wistorf, E, Linz, P, Jung, R, Birukov, A, Gimenez-Rivera, VA, Wilck, N, Bartolomaeus, T, Dechend, R, Kleinewietfeld, M, Forslund, SK, Krause, A, Kokolakis, G, Philipp, S, Clausen, BE, Brand, A, et al..
Skin Sodium Accumulates in Psoriasis and Reflects Disease Severity
J Invest Dermatol 142, 166-178, 2022. (Epub 2021 Jul 5)

Maksymowych, WP, Lambert, RGW, Caplan, L, van den Bosch, FE, Ostergaard, M.
Improving the design of RCTs in non-radiographic axial spondyloarthritis
Nat Rev Rheumatol 18, 481-489, 2022. (Epub 2022 May 13)

Martens, A, Hertens, P, Priem, D, Rinotas, V, Meletakos, T, Gennadi, M, Van Hove, L, Louagie, E, Coudenys, J, De Muynck, A, Gaublomme, D, Sze, M, van Hengel, J, Catrysse, L, Hoste, E, Zajac, JD, Davey, RA, Van Hoorebeke, L, Hochepied, T, et al..
A20 controls RANK-dependent osteoclast formation and bone physiology
EMBO Rep 23, e55233, 2022. (Epub 2022 Oct 4)

Martens, S, Takahashi, N, Blancke, G, Vandamme, N, Verschuere, H, Divert, T, Vuylsteke, M, Berx, G, Vandenabeele, P.
MLKL deficiency in Braf(V600E)Pten(-/-) melanoma model results in a modest delay of nevi development and reduced lymph node dissemination in male mice
Cell Death Dis 13, 347, 2022. (Epub 2022 Apr 14)

Maschalidi, S, Mehrotra, P, Keceli, BN, De Cleene, HKL, Lecomte, K, Van der Cruyssen, R, Janssen, P, Pinney, J, van Loo, G, Elewaut, D, Massie, A, Hoste, E, Ravichandran, KS.
Targeting SLC7A11 improves efferocytosis by dendritic cells and wound healing in diabetes
Nature 606, 776–784, 2022. (Epub 2022 May 25)

Mehrotra, P, Ravichandran, KS.
Drugging the efferocytosis process: concepts and opportunities
Nat Rev Drug Discov 21, 601–620, 2022. (Epub 2022 Jun 1)

Moerkerke, B, Seurinck, R.
Discussion on "distributional independent component analysis for diverse neuroimaging modalities" by Ben Wu, Subhadip Pal, Jian Kang, and Ying Guo
Biometrics 78, 1118-1121, 2022. (Epub 2021 Nov 15)

Moon, S, Janssens, I, Kim, KH, Stijlemans, B, Magez, S, Radwanska, M.
Detrimental Effect of Trypanosoma brucei brucei Infection on Memory B Cells and Host Ability to Recall Protective B-cell Responses
J Infect Dis , jiac112, 2022. (Epub 2022 Apr 1)

Morioka, S, Kajioka, D, Yamaoka, Y, Ellison, RM, Tufan, T, Werkman, IL, Tanaka, S, Barron, B, Ito, ST, Kucenas, S, Okusa, MD, Ravichandran, KS.
Chimeric efferocytic receptors improve apoptotic cell clearance and alleviate inflammation
Cell 185, 4887-4903, 2022. (Epub 2022 Dec 22)

Munro, DAD, Movahedi, K, Priller, J.
Macrophage compartmentalization in the brain and cerebrospinal fluid system
Sci Immunol 7, eabk0391, 2022. (Epub 2022 Mar 4)

Murgaski, A, Kiss, M, Van Damme, H, Kancheva, D, Vanmeerbeek, I, Keirsse, J, Hadadi, E, Brughmans, J, Arnouk, SM, Hamouda, AEI, Debraekeleer, A, Bosteels, V, Elkrim, Y, Boon, L, Hoves, S, Vandamme, N, Deschoemaeker, S, Janssens, S, Garg, AD, et al..
Efficacy of CD40 agonists is mediated by distinct cDC subsets and subverted by suppressive macrophages
Cancer Res , in press, 2022. (Epub 2022 Aug 18)

Mylka, V, Matetovici, I, Poovathingal, S, Aerts, J, Vandamme, N, Seurinck, R, Verstaen, K, Hulselmans, G, Van den Hoecke, S, Scheyltjens, I, Movahedi, K, Wils, H, Reumers, J, Van Houdt, J, Aerts, S, Saeys, Y.
Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq
Genome Biol 23, 55, 2022. (Epub 2022 Feb 16)

Naesens, L, Muppala, S, Acharya, D, Nemegeer, J, Bogaert, D, Lee, JH, Staes, K, Debacker, V, De Bleser, P, De Bruyne, M, De Baere, E, van Gent, M, Liu, G, Lambrecht, BN, Staal, J, Kerre, T, Beyaert, R, Maelfait, J, Tavernier, SJ, et al..
GTF3A mutations predispose to herpes simplex encephalitis by disrupting biogenesis of the host-derived RIG-I ligand RNA5SP141
Sci Immunol 7, eabq4531, 2022. (Epub 2022 Nov 25)

Naesens, L, Nemegeer, J, Roelens, F, Vallaeys, L, Meuwissen, M, Janssens, K, Verloo, P, Ogunjimi, B, Hemelsoet, D, Program for Undiagnosed Rare, D, Hoste, L, Roels, L, De Bruyne, M, De Baere, E, Van Dorpe, J, Dendooven, A, Sieben, A, Rice, GI, Kerre, T, et al..
Mutations in RNU7-1 Weaken Secondary RNA Structure, Induce MCP-1 and CXCL10 in CSF, and Result in Aicardi-Goutieres Syndrome with Severe End-Organ Involvement
J Clin Immunol 42, 962-974, 2022. (Epub 2022 Mar 23)

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